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Detailed information on CNT30564842


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550000Actinidia chinensisIpomoea triloba19.7374.980.1191forward
CNT3071772Actinidia chinensisQuercus suber2211.8984.04213forward
CNT30650744Actinidia chinensisRosa chinensis33.4735.5381.79324forward

Expression of CNT30564842

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKAPGTPMASSQSKLTLNEASSAVATEVIVAIQFSRLGDCLGRG*

>peptide 2 (39 aa)
MQELMYWVKHAQLSMCHNNEWLYYCMGVQPAPESPAFSG*

>peptide 3 (29 aa)
MASTFRHLVVGEAFCWRRSLWRLCLSVSG*

Sequence

>CNT30564842
CTTTCACCCGTGAGAGAGGAATGACTTGCATTTACCAATTTGTTGCGTCAATATAAAAGGTTTGTTCTGAGCTTTGTTGCCGTTATCGTCCGAGCGAGAG
ACAGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAGCATTGATCAGCCGGGAGTGCTTGCTCTGTGAAATTCCATTCCTTGTAAACAACAGAAGACAGT
TCCATTGCATATTTAGCTGGAAAGACCGTTTTCTCAAGTACCCCGCCAGCGTTGATGAGGATCTGTCGGGCCAAGCCATTTATATACATAGTATCGCGGA
AGTGAGGATGCAAGAGCTTATGTATTGGGTGAAGCACGCTCAATTGTCTATGTGTCACAATAACGAATGGCTCTATTACTGCATGGGTGTTCAACCTGCA
CCAGAATCACCGGCTTTCAGTGGCTAATGAGCTGATGGTAGCCTGAATCATTTACAGCAGCATAGGCTTTAGCCAACTGCCACACTGAACCTTCGATACC
GACTTCTGCTGGAGTGAAGACTTGACTCTTGGCACCGTGTGTGTCCCCTTGTGGATGTGGTAGGCTCAACTCAATCGCCAATGGCTTCAACGTTCCGTCA
TCTTGTAGTAGGAGAAGCGTTCTGCTGGCGTAGGTCTTTGTGGAGGTTGTGTTTATCCGTCTCAGGGTAAACCCAAGAATTGCAAACGAAATGGACTTTA
CCGTGCCCGGGCACGTCTTCTAAGGTCACCGTCTTGAGGTAGACCTCGTAGCGGTGGTGGTTCTTGATTATGAAAGCTCCCGGGACACCCATGGCATCAT
CCCAATCAAAACTAACGTTGAATGAGGCATCGTCAGCGGTCGCCACCGAGGTGATTGTTGCAATCCAGTTCTCAAGACTTGGAGATTGTTTGGGCAGAGG
TTGACTCTCTCTCTCTCTCTCTCTCTCTCTGTTATTGTTCACCACATTTGTATGATGTAACGAACCGC