Detailed information on CNT30617240


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FLB5|LAC12_ARATH, E-value = 7e-138

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317742Sesamum indicumCorylus avellana10.9955.0778.29304forward
CNT30487902Sesamum indicumOlea europaea14.984.682.77412forward
CNT30565003Sesamum indicumActinidia chinensis5.6835.0485.99157forward
CNT30207662Sesamum indicumHelianthus annuus12.3621.7779.24342forward
CNT30713124Sesamum indicumMalus domestica golden4.4133.3383.61122forward
CNT3024374Sesamum indicumPopulus trichocarpa4.5955.4683.46127forward

Expression of CNT30617240

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MSHANQEANKYEGKASDIRQNHGSELLHLLLALCSQREPRGRRTRKRNKRYCCYSCKPPFPLQSCGNFRWNVMLQVLKFEGKNGVCW*

>peptide 2 (31 aa)
MGSAFHHSPEHHQHQLTLNSEYNERKISISK*

>peptide 3 (29 aa)
MLLELYIIDEGPLVTKKKGSFTLWLWEGI*

>peptide 4 (39 aa)
MFVAHQHHFLPGKQLPSPSRCGHPSDSASARPLNTCCIS*

>peptide 5 (39 aa)
MHMCCIAASTYSLAFLFLWLSMFRVTWSWTSKDSETNLC*

>peptide 6 (37 aa)
MTQVTYSYLRKNNFDAYVLHCCFHLLIGIFVFMAIYV*

>peptide 7 (34 aa)
MPPKCTFLSLDGKPVQNLPVNSNIITSSVYNVDH*

>peptide 8 (85 aa)
MIDVSRHRHLSWTSEAGCEGGGSGCVIKCRHSWHNWLDSSTFGGAGGRFIFKNRCGCGIIKWCTLSASIGTCCDVVSGWWLVGCD*

>peptide 9 (69 aa)
MQTKKLTSMKARQVTYDKIMVVNFCICYWHCAHKENQEAEEHEKGTKGIAVIPVSLHFHSSRVAIFGGM*

>peptide 10 (62 aa)
MLVGTGTCLGLLKLVVKEVAVAVSLNAGIVGITGLIVAPLAGQGADLYSRIAVVVVLSNGAP*

>peptide 11 (43 aa)
SNPNPKPLFPKIDNDWSKISASGNPVTMRVACLLLLGDLSNSC*

Sequence

>CNT30617240
TTCAAATCCAAATCCAAAACCCCTTTTCCCCAAAATCGATAATGATTGGAGCAAAATTTCGGCATCCGGGAATCCTGTAACAATGCGGGTTGCTTGCTTA
CTTCTGTTGGGCGATTTATCTAATTCATGCTAAAAGTATAGTTTTAGTCAATTTGATTGATTTGGAGGACACCAGAATTTGCTGTAAAATCTTCTGTTGC
TTCAACTAGCAAAGGGGAAGGTCTGCAGGAGGAGCCTCTAATGTTTGTAGCTCACCAACACCATTTTCTACCAGGAAAGCAGTTGCCAAGCCCCAGCCGA
TGTGGACATCCAAGTGACAGTGCATCAGCCAGACCCCTGAACACTTGCTGTATTTCGTAGAGGAGGATCTACGAGATTAAATTTGGCTGTATCTGTACTT
GGGTTGAAATTTCCAAAGCCTTCAGCAATTATATAGAAGTCGTAACCATGAAGATGAATTGGGTGGTTCTCAGCCGTGAAGATACTTGTTCCCTGCAACA
CCACCTGAACTGTTTCCCCATATTTTAATGGGTACAACTTAGTCCCTGGAACAGGTTGCCATAGTGTGCGGCTCACGTTTCCAGTATAATCAAATTTTAC
TGGGGGATTTGCTGGAAAATCCCTCGTGAAGACTCCAGGTATACCTTGTTGATGTGCTTGAAGTAAGGAAAAATTGGACGGAAGCACAAACGATACATTG
TTCATGCTGGCAGTAAATCGAGTCCCATTTGGACCCTGACAGCTACTACGACTGGCACCAGGGGGACAGTTGTTGAGTCCTAGTCCAACTGTGAAGAACA
GATTATGATCGATGTTAGTCGGCACAGGCACTTGTCTTGGACTTCTGAAGCTGGTTGTGAAGGAGGTGGCAGTGGCTGTGTCATTAAATGCCGGCATAGT
TGGCATAACTGGCTTGATAGTAGCACCTTTGGCGGGGCAGGGGGCAGATTTATATTCAAGAATCGCTGTGGTTGTGGTATTATCAAATGGTGCACCTTGA
GCGCTAGCATAGGCACGTGCTGCGATGTAGTATCTGGCTGGTGGTTGGTCGGCTGTGATTAGGATATCAGTGGTCTGGCCTGGTCCAAGCATGAGCACCG
AGGTGGTGAAGGGTTTAACATAAGAGGCATCAGCTCCAACCACTGTCAGCTTGTGATTAGCAACCTTGAAGAAAAGTTGTTGATTGAGTGCAGAATTGAC
AACCCTGAGAAGATTTGTCTCTCCGGAGTCCACTGGAACTATTATTGTGTCTGCATTAGGATGATGACCAAAATGTTATTTCCCAGCTAAGTCAGTGTAT
GATGGCATATTAGTCATGTTTCCCATATGACACAGGTGACCTATTCTTATTTACGCAAGAATAACTTTGATGCATATGTGCTGCATTGCTGCTTCCACCT
ACTCATTGGCATTTTTGTTTTTATGGCTATCTATGTTTAGAGTTACATGGAGCTGGACCAGCAAAGATTCAGAAACCAACCTCTGCTAGAGCAATTGTAA
AGATCACCAGGTTGACCATTGATTGTGTAAGCATCGGAAACATTAGGAGCCGCTCCTGTTCTTGTGGCTTGTCTCACAACATCAATGGGATCCGCATTCC
ACCATTCACCTGAGCACCATCAACATCAGTTAACTCTCAATTCAGAATATAATGAAAGAAAGATTAGTATTAGTAAATGAACTCTAAAGGACAATGGGGA
TGAGCCAATTTTTCTTATGCTACTCGAGTTGTACATTATAGATGAAGGGCCATTAGTTACCAAGAAGAAGGGCAGTTTCACGCTTTGGCTTTGGGAAGGG
ATATGAATCTCCTTCTTTAGGGCGAATGATCAAAGCTCCATAGACAGTGGCTCTGAGCCATGAACTGTGAGCATGCCACCAAAGTGTACCTTCTTGTCCT
TGGATGGTAAACCGGTTCAGAATTTACCAGTGAATAGTAACATTATAACGAGCTCTGTTTACAACGTTGACCACTAGAGTGTCTCCATTGTTCACTTCCA
ATGTTGGTCCTGGATACATCCCATTCACTGTAATAGTACTGCGGGTTCTGCACAGCCTCTTCACTGGCGTCGCTTGCACCTGTTTCACAAGAGTAGCTCA
ATTCATATATCTATGTCCCATGCAAACCAAGAAGCTAACAAGTATGAAGGCAAGGCAAGTGACATACGACAAAATCATGGTAGTGAACTTTTGCATCTGT
TATTGGCATTGTGCTCACAAAGAGAACCAAGAGGCCGAAGAACACGAAAAAGGAACAAAAGGTATTGCTGTTATTCCTGTAAGCCTCCATTTCCACTCCA
GTCGTGTGGCAATTTTCGGTGGAATGTGATGTTACAGGTGCTAAAATTTGAAGGAAAAAACGGTGTTTGCTGGTGAGAGAATGGGAGTGATGGTGTCCTT
TATATACACAAGAACTGGAGGGAGAGGGGGTTCTTCATTCTTGAGGTTGGCAGATTAGGTTATGATAGTCAGATTAGAGGGCAGAATTTAGTTCAACCCT
AAGTATCAGTTGTTGCACCCACTGGCTGATCAAGATCAGGAAAAATATTCGTTTATGCTTGATTCATAAGTCATTTTCTTGAGGTTGGTTTTTTAACAGA
GACTTATTATTTAAGATTTTGTTGTATTAATTATTACAAAAAAATGGTCTTGTTCTTTTGTGAAACTTTCTAGGTGATGAAACTTGTTGCCCATGCACTT
GTACTTGTATTTCATTCCTCATACCCACTTTTCCCACCCAAATAGGAATTCTTGTCACAATTTTCC