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Detailed information on CNT30713124


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FLB5|LAC12_ARATH, E-value = 1e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617240Malus domestica goldenSesamum indicum33.334.4183.61122forward
CNT3024374Malus domestica goldenPopulus trichocarpa47.2775.5586.13173forward

Expression of CNT30713124

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPPQSTFLPLNCKAVGVAPSWPNRALSHKFWPICPSSSHLPNP

>peptide 2 (43 aa)
MVYASETFGAAPVIVACLKTSIGLAFHHSPRRRVVSLFGLVKG*

Sequence

>CNT30713124
CTTGAGCAATTGTAAAGATCACCAGGTTGACCATTGATGGTGTATGCATCAGAAACATTTGGAGCTGCTCCTGTCATAGTCGCCTGCCTCAAGACATCGA
TAGGGTTAGCGTTCCACCATTCACCGAGAAGAAGGGTTGTTTCACTTTTCGGTTTAGTGAAGGGGTAGGAGTCTCCTTGTTTAGGATGAATGATGAGTGC
TCCGTAAACGGTGGCTCTAAGCCATGAGCTGTGAGCATGCCACCACAGAGTACCTTCTTGCCCTTGAATTGTAAAGCGGTAGGTGTAGCTCCCTCCTGGC
CTAATCGGGCACTGAGTCACAAATTCTGGCCCATCTGCCCATCCAGTTCTCATTTGCCTAATCCCA