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Detailed information on CNT30317742


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 6e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617240Corylus avellanaSesamum indicum55.0710.9978.29304forward
CNT30567016Corylus avellanaActinidia chinensis43.32483.26239forward
CNT30646848Corylus avellanaRosa chinensis27.5433.1284.87152forward
CNT30713086Corylus avellanaMalus domestica golden21.5629.6886.55119forward
CNT30572762Corylus avellanaVitis vinifera40.5832.1884.82224forward

Expression of CNT30317742

Peptides detected in this lncRNA

>peptide 1 (97 aa)
VPLGPWHRLALKCFGHLLSPRPTVKKRFSSITVGTSTFLGLLKLLLKAVTVGVSLKAGREGITGLLDAQFLAAQGADLYSRMAVVVVLSNGAPGALA*

>peptide 2 (29 aa)
MHSFWQRKELTCIQEWLWWWCCRMVRLGH*

Sequence

>CNT30317742
GTTCCATTGGGGCCCTGGCACCGCCTGGCTCTAAAATGTTTTGGGCATTTGTTGAGTCCTAGACCGACTGTGAAGAAGAGGTTTTCATCGATCACAGTCG
GGACTTCCACTTTCCTGGGACTTCTGAAGCTTTTACTGAAGGCGGTGACAGTGGGTGTGTCATTGAAGGCCGGTAGAGAGGGCATAACGGGTTTGCTTGA
TGCACAGTTTTTGGCAGCGCAAGGAGCTGACTTGTATTCAAGAATGGCTGTGGTGGTGGTGTTGTCGAATGGTGCGCCTGGGGCACTAGCGTAGGCGCGT
GCTGCCGCGTAGTATCGAGCTGGAGGCTGGTCACCACTGATCAAAACGTCGGTGGTCTGGCCAGGGCCTAGCATGATGACTGTGGTGGTGAAGGGTTTGG
TGTAGGAGGCATCAGCGCCAACAACTGTGAGCTTGTGGTTGGCAACCGTGAAGAACAGCTCTTGGTTCAGGGCGGAGTTGATGACTCGGAGGAGGTTTGT
CTCGCCGGAGTCTATTGGAACTATGACGGTGTCTGCATAGGCATCATCTTTG