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Detailed information on CNT30565003


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FLB5|LAC12_ARATH, E-value = 3e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617240Actinidia chinensisSesamum indicum35.045.6885.99157forward

Expression of CNT30565003

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSSTDDTNMRADLLEAPPMTAILQLHSLQGKP*

>peptide 2 (39 aa)
VTGPECGEKNTVFSYNNSKKQVIYVIERILSNFEHVFNR*

Sequence

>CNT30565003
AGTAACTGGTCCCGAATGTGGGGAAAAGAACACTGTTTTTTCGTACAATAACAGCAAAAAGCAAGTGATCTATGTCATAGAGCGTATCTTATCTAATTTT
GAGCATGTCTTCAACCGATGATACTAACATGCGGGCAGATCTGCTGGAGGCACCGCCAATGACTGCAATTCTCCAACTCCATTCTCTACAAGGAAAGCCG
TAGCTAATCCCCAGGGACACTAGCTGTATTCCTCATTGGTGGATCAACAAGGTTAAACTTTGATGTATCAGTTTTAGGATCAAAGTTTCCAAAGCCCTCT
GCGATGATGTAAAAGTCATAACCATGCAGATGAATTGGGTGGTTCTCAGCCGTGAAGATACTTGTTCCCTGTAAAACCAACTGCACTCTTGCACCATATT
TTAGCTTGTACAACTTAGTCCCCGGAACAGGCTGCCAGAGTGACCGGC