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Detailed information on CNT30207662


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 9e-145

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617240Helianthus annuusSesamum indicum21.7712.3679.24342forward
CNT30333534Helianthus annuusCynara cardunculus6.1132.8887.596forward

Expression of CNT30207662

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MNRLWSISVGTMGFLRLLKLVVKAVAVAVSLYAGRGGIIGFEVADLYSKMAVVVVLSNGAPCALA*

>peptide 2 (52 aa)
FRNKTLSLNLNNMGVNTVVLTSAIAIAVVQVAVMINNGIISVKVRPDKPKQD*

>peptide 3 (48 aa)
MVYASETFGAAPVLVASRTTSIGFASHHSPAIVIIIILDHICNILDFC*

>peptide 4 (42 aa)
MSFSTQVNLVAVAPVSALAQAHPPQQTLWPDPNRCVRLSGSA*

Sequence

>CNT30207662
TTTTCGAAATAAGACCCTTTCTTTGAATTTAAATAACATGGGTGTTAACACCGTCGTTCTCACCAGCGCAATTGCAATAGCGGTGGTGCAGGTGGCGGTG
ATGATCAACAATGGTATCATTTCAGTTAAGGTCCGACCCGACAAACCGAAACAGGATTAGGTGACAATTGTTTTTGCTGTGCAAGATTAGGGGACATTAA
TTTCGCACACCAACTGTTTGATAAAATGCTTGATCGCGATGTCAATGCCTGGAATGCAATAAAGGAAGAATCTATGCAATATGGGGAGCAGTTGATGGGA
TAACAATCGTGTTTTTCACGATAGGAATGTAGGCTTGAAGATCAATGAGTTTTAGCACACAGGTAAATCTGGTGGCGGTTGCTCCAGTTTCTGCATTGGC
CCAGGCCCATCCTCCACAACAAACACTGTGGCCAGACCCCAACCGATGTGTACGTCTAAGTGGCAGTGCATGATCCAGGTAAGCTAACTGTATTTCTAAG
AGGTGGGTCCACAAGGTTGAATTTAGCAGTATCGGTTTTAGGGTTGAAGTTTCCGAATCCCTCTGCAAGTATATAGAAATCGTATCCATGAAGATGAATC
GGGTGGTTCTCAGCTGTAAAGATATTTGTTCCTTGCAACACAATCTGAACACTTGATCCATATTTCAACTTATACACCTTGGTCCCACGAGTAGGCTGCC
ACAACGACCGGCTTACATTACCCGTATAATCAAAGGTAACCGGTGGCTTTGCCGGAAAATCGGTTGTGAAGACCCCTGGTATTCCTTGGTGATGTGCTTG
AAGTATAGAGATATTTGATGGGAGTACAAACGACACATTGTTCATGCTGGCGGTGAAGCGGGTCCCATTGGGCGCCTGACAGTTTCTAGCCCGTGTTTTT
GGGGGGCACTGGTTGATTCCAAGTCCCATCGTGATGAACAGATTGTGGTCAATTTCAGTCGGGACAATGGGTTTTCTAAGGCTTCTGAAGCTGGTGGTGA
AGGCGGTAGCGGTGGCAGTGTCGTTATATGCCGGGAGAGGCGGCATAATTGGCTTTGAAGTGGCGGATTTGTACTCCAAAATGGCGGTGGTGGTGGTGTT
GTCGAACGGTGCACCTTGTGCACTGGCGTAAGCCCGTGCAGCAATGTAGTAACGGCCTGTCGGCTGGTCGGCTTTCATGAGGACATCGGTGGTCTGTCCC
GGTCCAAGCATGAGGACTTTCGTGGTAAAGGGTTTTACGTAGGAAGCATCCGCTCCCACCACTGTAAGCTTGTGGTTAGCAATAGTGAAAAATAGTTGTT
GATTTAGAGCAGCATTAATCACCCGAATTAGGCTTGTTTCTCCTGGGTTGACTGAACTGTAGAAGCAGACCTTTGCTAGAGCATTTATAGAGATCACCAG
GTTGACCGTTAATGGTATACGCATCAGAAACGTTTGGAGCTGCACCTGTTCTTGTGGCTTCTCGTACAACATCTATCGGGTTTGCATCCCACCATTCACC
TGCCATCGTCATCATCATCATATTAGATCACATATGTAATATTTTGGACTTCTGCTAAATGTACATTTTCT