Detailed information on CNT30487902


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 3e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617240Olea europaeaSesamum indicum84.614.982.77412forward
CNT3093762Olea europaeaSolanum tuberosum40.0435.7883.08195forward
CNT30567016Olea europaeaActinidia chinensis28.3413.8684.06138forward
CNT30207564Olea europaeaHelianthus annuus39.2249.8782.2191forward
CNT30713086Olea europaeaMalus domestica golden33.2640.480.25162forward

Expression of CNT30487902

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MCLQQGKVRWKHKRYVVHAGSESSPIWSLTISTSGTSGAIVES*

>peptide 2 (52 aa)
NEIEFGCISLWIEISKSFSKNIEVISMEMNRMVFSREDTRSLQHYLNSCSIL*

Sequence

>CNT30487902
CAACGAGATTGAATTTGGCTGTATCTCTCTGTGGATTGAAATTTCCAAATCCTTCAGCAAGAATATAGAAGTCATATCCATGGAGATGAATAGGATGGTT
TTCAGCCGTGAAGATACTCGTTCCCTGCAACACTATTTGAACTCTTGCTCCATACTTTAATCTGTATACCTTAGTCCCGCGAGCGGGTTGCCATAGTGAT
CGGCTTACATTGCCAGTATAATCAAATATCCGAGGTGGATTTGCTGGAAAATCAGTTGTGTATACTCCAGGTATACGCTGCTGATGTGCCTGCAGCAGGG
AAAAGTTCGATGGAAGCACAAAAGATACGTTGTTCATGCTGGCAGTGAATCGAGTCCCATTTGGTCCTTGACAATTTCTACGTCTGGCACCTCTGGGGCA
ATTGTTGAGTCCTAAACCGACGGTAATGAAGAGATTCTCATCAATTTCTGTGGGTACTTCGACTTTTCTTGGGCTTTTCAAGCTTTT