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Detailed information on CNT30162005


BLAST search results

BLAST vs Swiss-Prot:
sp|O22342|ADT1_GOSHI, E-value = 2e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488016Pistacia veraOlea europaea10.8437.5783.85130forward
CNT30606478Pistacia veraGossypium raimondii11.6866.0486.43140forward
CNT30369687Pistacia veraOryza glumipatula8.5131.8785.29102forward
CNT30572637Pistacia veraVitis vinifera8.515088.24102forward
CNT3037332Pistacia veraCucumis melo22.5241.180.74270forward

Expression of CNT30162005

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MGKTELKEPASYLLHHGRVLSLINHGDFPCKVPYTISYKDI*

>peptide 2 (50 aa)
MIKPCNTIRFQCLPVDINQTFELPLSSLQRSLGIIIGQTDMSIIQRVHNE*

Sequence

>CNT30162005
ATTCCGACACATGAGATGCTGAATCCATGATAAAGCCCTGCAATACCATCAGATTTCAATGTCTTCCTGTAGACATCAATCAGACCTTTGAATTGCCTCT
CTCCTCCCTTCAACGCAGCCTTGGCATCATCATTGGCCAAACGGATATGAGCATAATCCAAAGAGTACACAATGAGTAGCGCTGAGGCACCAGCAGCACC
CCCACAAGCCAAGTTTCCAGCAAACCATTTCCGGTAAACCATCTTTATCTTTCTTGAAGTTGGAAAGCCTCTTGAAGTAATCATTGAAAGCGAAGCTCAG
GCCCTGGGACAAATTTAAGAAAACAGTTAGCATCCAATAACAGCTGAACATGAAATCTGTTTACACAAAAAAATAAATAAATAAAAAGAATAAACACACT
AACCTGGTGGGGAAGTAACGGATGACATTGGCAGTATTTCTTCTCCACAAAGAAATAAGCCCCTCATCCTCAATCATACACCTCAAACAGTAATCAAAAG
GTTCAGACAGCCTACCAGTCTTGATCATCTAATCATGGTTCTGATTCAAAAACTTAAGACGCTCATAGGGAGCTAGAGTTGTTTTCAACCCAGCAGCAAG
AACTCCTCCCAAAAGGAAATCGATGGAATAATGAGCAAGACCTTTCCCAGATAGGCCTTGGCCAAAAACAGGAGACATAGTATATGGTACAATGGAAGGA
TCAGTGGAAGCTCCACATGATCGCACCAAGGGGTACTGGAATGCCGTATTAGAGTAGTTCCCATATGCAGTGCATCTCTGATACATGGAAGGCCCGTTGA
AAGCTCCATTGCAGCCTTGATGGGAAAGACTGAACTGAAGGAACCGGCCAGCTACCTTCTGCATCATGGTAGGGTGTTGAGCTTGATCAACCATGGTGAC
TTTCCCTGCAAAGTGCCATACACAATCAGTTATAAAGATATATAAATTTGTAAGCAAAGAACAGTACACACACTGAATGAGATAAAACAACATATAAAAA
AAGAAAGAAAATAGTTCACATGCTCAATTTAGTGAAACAAAACTCAAGATATCATTTGATAAAGAGATAATCAGATAAATATACGAAGTAATTCTTGCGC
AATCCATATTAAGAAAAAAAAAAAAAGTGAAAAACTGAATCAGAGAACTCAGGACAAAGACATAAAAAACAAAGCATACAGTATGATGATCAATAGAGC