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Detailed information on CNT30526508


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695194Phaseolus vulgarisOryza sativa26.782879.15259forward
CNT30562751Phaseolus vulgarisActinidia chinensis22.2351.6881.4215forward
CNT30453511Phaseolus vulgarisSaccharum spontaneum25.1346.1178.6243forward
CNT30219415Phaseolus vulgarisKalanchoe fedtschenkoi24.9277.2479.67241forward
CNT30338974Phaseolus vulgarisEragrostis tef11.5824.6283.04112forward

Expression of CNT30526508

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMVLLSGPLPVAAAWTAKPKKPTMARRACLISAN*

>peptide 2 (39 aa)
MRFQEARPHEGGRGRCCCRCGGHELVLTCAVGGRELCLVE

Sequence

>CNT30526508
AGCCGAAAGACGTTTATAATATAGAGAGCAGGTACAAGAGTTGTTTTTTCTTAAGAGGATGAGAAGGTGTCAATGATGGTTTTGTTGAGTGGGCCCTTGC
CAGTGGCAGCAGCTTGGACTGCAAAGCCCAAGAAGCCCACCATGGCAAGACGTGCGTGCTTGATCTCTGCCAATTGAAGAGTGGCTTTCTTCTCTGGGTC
TGAGGCCAAACCAAGAGGGTCGAAGTAGCTGCCACCAGGGTACAACCTCTTTTCTGGGTCAAGCTCTGCGTTCCTCTGGAACTCAATGAACCCAATTACC
AGAACCTCGATCCAGATCAATGTGGTGATTGAGAATGGAAGTGGTTGTCCAAGGATGTGAAGAATTTTCAAGCAAAGATCATCTAAAACTGCAATGGAAG
GAAATGTTTGATTGATATCTGGAGAAGAAGCAAGGGCAGAGAAGCGTACCTTGCCGGCGTCCTGCCATGTGACACCGGTGAGCCACTCGACGGTGAGGGC
TCCGAGGGTGGCGAGCATGGCCCAGCGTCCGTGGATGAGCTCGCACTCGCGGAACCTCTGGAGGCCGAAGACCTCGCTGTAGGGCTGGAAGGGAGTGGAC
TTCACGTCTGCAACCTCGGTTCTGGTCCAGCGAGTCCAGCTCAAACTGCAAATACTCCGCGGGCTTTCCGAGCCCAAACGGGTCGAACCCGTAGTCCCCG
ATAAGGCTCCCGTCAAGCCATTCTGGTGACTTCGCGCCGGGGTACCACAACGGCCTCTCGGTGCCCGAGCCCTTCGACACCTTCTTGGGCGCGGCCTTCT
TCTTCGGCCCGAACCCGAATCGGGCCTGGACCCGCCCCGACCCAGAATGCGCTTCCAGGAGGCGCGTCCCCATGAAGGAGGACGTGGCCGCTGCTGTTGC
CGTTGCGGTGGCCATGAGTTGGTGCTAACTTGCGCTGTGGGGGGGAGAGAGTTGTGCTTGGTAGAGT