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Detailed information on CNT30695194


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 3e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526508Oryza sativaPhaseolus vulgaris2826.7879.15259forward
CNT30221568Oryza sativaHordeum vulgare34.730.6687.23321forward
CNT30562751Oryza sativaActinidia chinensis16.2236.0685.33150forward
CNT30453511Oryza sativaSaccharum spontaneum36.4363.9592.88337forward
CNT30219415Oryza sativaKalanchoe fedtschenkoi24.9774.0480.95231forward
CNT30680853Oryza sativaTriticum urartu32.4353.7692.67300forward
CNT30338974Oryza sativaEragrostis tef17.7336.0494.51164forward
CNT30581456Oryza sativaEchinochloa crusgalli34.3855.396.54318forward

Expression of CNT30695194

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTSTSIQISVEIENGSGCPRYDDPSTSST*

>peptide 2 (37 aa)
MQVAINHQPSFPNLSSNQQKDDLSSLHTLPARSSSQN*

>peptide 3 (42 aa)
MTSPLSIPSQLARHHKTKQRARTHTNASIPFELRAKELKLRG*

>peptide 4 (50 aa)
MVLLRGPLPVAAACTAKPRKATMARRACLISASCSRSFFSGSDANPSGSK*

Sequence

>CNT30695194
CATTAATTCATCATCTTGGGTGTTCTTATATTACAAATCACCACCATGCAAGTCGCCATTAACCACCAACCCAGCTTTCCTAATTTAAGTAGTAATCAAC
AAAAGGATGACCTCTCCTCTCTCCATACCCTCCCAGCTCGCTCGTCATCACAAAACTAAACAGCGCGCGCGAACGCACACCAACGCATCGATCCCGTTTG
AATTGCGCGCGAAAGAGCTTAAATTAAGAGGATGAGGAGAAGGTGTCGAAGATGGTGTTGTTGAGGGGCCCCTTGCCGGTGGCGGCGGCCTGCACGGCGA
AGCCGAGGAAGGCGACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGCCGCTCCTTCTTCTCCGGGTCCGACGCCAACCCGAGCGGGTCGAA
GTAGGACCCCCCCGGGTACAGCCTCTTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTAGCCGATGACGAGCACCTCGATCCAGATCAGCGTC
GAGATCGAGAACGGCAGCGGCTGCCCCAGGTACGACGACCCATCCACCAGCTCCACCTGAAAAACACCATCGGACCATTCCTACGTCAGTGTCATCATCC
TCGTCCGCGGCGCCGGCGATACGTAGTAACCAGGGTTTTAAATCTTTAGCTATAACTATTTAAAAAAAGATGTAGCAATTTGTTCTCATGTACAATTTAG
TCATAGCTGCCACTATTTTGAGAGGCTAAACGCTAAATGTTTTAGCCCGCTAGCTATTTGAAACAATGGTAGTGAGAAACGCCCAGAGGTTTTTCGGCTA
TCCCCACGGGCTAGACGACCTGGATTTGAAACCTTACTCTTTCTAATTATTTGATATAATAGGTCATTTTTTAATATTTGCTTTTTAAAAAAAATGCTGG
TAGTAATGTATGGGGGAGTATCGTG