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Detailed information on CNT30507382


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30172221Nicotiana attenuataTrifolium pratense19.6722.6488.3360forward
CNT30653438Nicotiana attenuataRosa chinensis23.2823.0590.1471forward
CNT30210362Nicotiana attenuataHelianthus annuus30.4930.2982.893forward
CNT30356369Nicotiana attenuataLactuca sativa34.755.6482.08106forward
CNT30154450Nicotiana attenuataPrunus persica33.4433.4484.31102forward

Expression of CNT30507382

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWWNVGLFLKAGLRVANVWPALSKHGVESCGPNVSMGCLAPRAGRTA*

Sequence

>CNT30507382
GCCGAGCCTTGTAACGTGAGCTTGTGACCTAAGTGGGGGCAATAATGTGGTGGAATGTTGGGTTGTTTCTGAAGGCTGGGCTTCGAGTGGCTAATGTCTG
GCCTGCCCTATCCAAGCATGGAGTTGAGTCATGTGGCCCAAACGTAAGTATGGGCTGCTTGGCTCCTAGAGCGGGGCGGACTGCGTGAGGCTGGTTTCAC
AGAGCAATGAACAGCTCCCGCTCCGTACAGTGGAAGGATAACAGGTCGGTGCTCTCCAAGTCCAACAAAAACCTGATGGGCTTCTCCAATTAAACCACCA
CTTTT