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Detailed information on CNT30154450


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698009Prunus persicaQuercus lobata48.8547.9188.59149reverse complement
CNT30372997Prunus persicaArabidopsis thaliana24.5910.3486.6775forward
CNT30499557Prunus persicaCoffea canephora46.8946.5883.92143reverse complement
CNT30618136Prunus persicaSesamum indicum53.7728.8287.2164reverse complement
CNT30406606Prunus persicaBeta vulgaris40.3339.8186.18123forward
CNT30526114Prunus persicaPhaseolus vulgaris34.4334.5486.67105forward
CNT30507382Prunus persicaNicotiana attenuata33.4433.4484.31102forward
CNT30711674Prunus persicaGlycine max25.925.9989.8779forward
CNT3046251Prunus persicaPrunus dulcis100101.3395.08305forward
CNT30634223Prunus persicaCapsicum annuum24.2625.3486.4974reverse complement
CNT30235645Prunus persicaBrassica oleracea25.5725.4187.1878forward
CNT30509042Prunus persicaSolanum lycopersicum42.6242.4886.15130forward
CNT30146769Prunus persicaMedicago truncatula26.8926.9785.3782forward
CNT3059454Prunus persicaArabidopsis lyrata27.5427.7285.7184forward
CNT30612441Prunus persicaArabis alpina47.8747.484.25146reverse complement
CNT30647270Prunus persicaRosa chinensis49.1848.8690.67150forward
CNT30215606Prunus persicaHelianthus annuus43.6143.6184.21133forward
CNT30716661Prunus persicaMalus domestica golden67.8766.7789.86207forward
CNT30625980Prunus persicaDaucus carota28.228.284.8886forward
CNT30477933Prunus persicaArabidopsis halleri27.5427.7285.7184forward
CNT30410045Prunus persicaPapaver somniferum21.9722.6491.0467reverse complement
CNT30644641Prunus persicaCannabis sativa33.4427.4288.24102forward
CNT3030049Prunus persicaTheobroma cacao31.1530.9488.4295forward
CNT3058191Prunus persicaAmborella trichopoda25.2525.0889.6177forward
CNT30334668Prunus persicaCynara cardunculus36.0718.5283.64110forward
CNT30723384Prunus persicaLupinus angustifolius26.8926.9785.3782forward

Expression of CNT30154450

Peptides detected in this lncRNA

>peptide 1 (55 aa)
RAEQRKLVTQVGALRCWNIGPIWQVGFNVALFWRAHSKQRVGPCGLGEGSGLHGS*

>peptide 2 (47 aa)
MAGRVQCCFILACPFQAKSWAMWLGRRLWASWFLEWRALRKAGFTEQ*

>peptide 3 (34 aa)
MLLYSGVPIPSKELGHVAWAKALGFMVPRVEGTA*

Sequence

>CNT30154450
GCCGAGCTGAGCAACGCAAGCTTGTAACCCAAGTGGGGGCTTTGAGGTGTTGGAACATTGGTCCAATATGGCAGGTCGGGTTCAATGTTGCTTTATTCTG
GCGTGCCCATTCCAAGCAAAGAGTTGGGCCATGTGGCTTGGGCGAAGGCTCTGGGCTTCATGGTTCCTAGAGTGGAGGGCACTGCGTAAGGCTGGTTTCA
CAGAGCAATGATTACTTCCCGCTCTTGGCAGTGGAAGGATAACAGGTCGGTGCCACCTGGATCCACTGTGGCCTGCTAGATAGTCCCAATTGAACCAAAA
CTTTT