Detailed information on CNT30506771


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618136Nicotiana attenuataSesamum indicum20.9811.2592.1964reverse complement
CNT3069056Nicotiana attenuataQuercus suber22.626.5389.8669forward
CNT3094411Nicotiana attenuataSolanum tuberosum98.03100.3488.29299reverse complement
CNT30612154Nicotiana attenuataArabis alpina22.322.3788.2468reverse complement
CNT30410045Nicotiana attenuataPapaver somniferum21.9722.6491.0467reverse complement

Expression of CNT30506771

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSLVTWACDPSGGNNVMECWVVSEGWASGS*

Sequence

>CNT30506771
GCCGAGCCTTGTAACGTGGGCTTGTGACCCAAGTGGGGGCAATAATGTGATGGAATGTTGGGTTGTTTCTGAAGGCTGGGCTTCGGGTAGCTAATGTCTG
GCCTGCCCTATCCAAGCATGGAGTTGAGTCATGTGGCCCAAACGTAAGTATGGGCTGCTTGGCTCGTAGAGCGGGGCGGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAACAGCTCCCGCTCTGTGCAGTGGAAGGATAACGAGCTGGTGCTCTTCAAGTCCAACAAAAACCTGATGGGCTTCTCCAATTAAACCACCA
CTTTT