Detailed information on CNT30435180


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184478Aegilops tauschiiSecale cereale78.2576.0993.411820forward
CNT30287494Aegilops tauschiiTriticum aestivum15.4839.2695.56360forward
CNT30385899Aegilops tauschiiTriticum turgidum15.4838.7595.56360forward
CNT30657929Aegilops tauschiiTriticum dicoccoides15.484095.56360forward
CNT30720303Aegilops tauschiiTriticum spelta11.3554.6694.32264forward

Expression of CNT30435180

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MCVSLFNRSDGQLPRSSSASSSIGSQTAHNCEHGSV*

>peptide 2 (45 aa)
MNLIRYYFLETELVQRTISMNSLLIIELSYLFAGTYSYGWSWSAR*

>peptide 3 (63 aa)
MELTYSFFIQNCCVLYKYHIILQFLQRIVLCFYKYIIVLQAVNLTSFGCYQSQWQGHYLVLCY*

>peptide 4 (51 aa)
VRRAERGGCPHLVFFSLSPEDERRAAAQPSPSSLPRSAPRHAPPSLPPVDP*

>peptide 5 (62 aa)
MSDRFPGGRPCACPCSTAPTASCPEVPLLPLRLAAKRHTTASMVACEGTRRSLQDIRLYSSY*

>peptide 6 (30 aa)
MSTSCSARNQWREHIASYVFPIKSSRGKAL*

>peptide 7 (29 aa)
MVTVLSPVDFMDTRPTVVLPCPDQSRPLI*

>peptide 8 (31 aa)
MFFPLNPLGERHCKFPCVVQKKKSWPSPTAK*

>peptide 9 (30 aa)
MFSYASANHHCHLFCLINFLCSLYKVYLIR*

>peptide 10 (35 aa)
MAYLLCSYNILLKLEFFVQAIHLIFYYANQFQYKG*

>peptide 11 (33 aa)
MGGHGLLVDGHKQVIEALAQGLNQSCRYCKYLA*

>peptide 12 (43 aa)
MAGTLFSSMLLASQVYYFCLTEFIQEDSKTIINYRLQLSYLGH*

>peptide 13 (48 aa)
MSAAPPPNPLPPPFLDLRPGTPRLPFPLSIPSLTTIAGPTVVTMPRRP*

Sequence

>CNT30435180
GTGAGAAGGGCAGAAAGAGGTGGTTGTCCGCATTTGGTCTTCTTCTCCCTCTCTCCCGAAGATGAGCGCCGCGCCGCCGCCCAACCCTCTCCCTCCTCCC
TTCCTAGATCTGCGCCCCGGCACGCCCCGCCTTCCCTTCCCCCTGTCGATCCCTAGCCTAACCACCATTGCGGGGCCGACCGTGGTGACCATGCCGCGCC
GTCCATAGTCACAGCACCGCGCCCGCCGGTCCAGATGGCCGGGTTGCGACGGCCGTGTGACCTCGCATCATGGTGACCGTGCTATCCCCTGTCGATTTTA
TGGACACTAGACCTACCGTCGTCTTACCCTGTCCAGACCAAAGTCGCCCTCTCATCTGAAGCCGGTCTAGATCTTGATGTCTGACCGGTTCCCAGGTGGG
CGTCCATGTGCGTGTCCCTGTTCAACCGCTCCGACGGCCAGCTGCCCAGAAGTTCCTCTGCTTCCTCTTCGATTGGCAGCCAAACGGCACACAACTGCGA
GCATGGTAGCGTGTGAAGGTACAAGACGGTCTTTGCAAGACATCAGGCTCTACTCCAGCTATTGATATCCATTTTCAGGTGAAAAGAAATGTCTAAGATG
GTAATTAATATCCAAGGTTATGTTTCGGGGAACAATTTGTTGTCGAAAACATTCCTGCTTAATTTGTGATCATGTGGAGCACATTTGATTTAGTACAAAA
TACAGGTCACGGGTTCTGAAAGTTCTATCGGACGAACCAATGCTCGTGCAATATAGTTGTATTACTGTTACAGATGTGATTGTCTTTGTTGTAGACTTAA
CACGATTTTAAATAGCAAAACTGAAGTAGCTAGCTAAGTATGCATAGTTAGCAAACTGACTAGCTATCTGACATGTGTTCCCTATACATTTAATGTGCTC
TGTTAGCTACTAACTGGTTCCAGCTGATTTACTTAATTTTGTACACAAGAAATACTATCTTATTATAGATAAATCGCAAAACAAACGATAATCCAATATT
TGCCCACCCCCTTCTTATGTAGCTGATTGGTTCACAGAGATAACAATCTTGTCGTCACAACTGCCCTGAAGAACTGTGAAGTGTCATGGAACTTACATAT
TCCTTTTTTATACAGAACTGTTGTGTGTTGTATAAATACCACATTATCTTGCAATTCTTACAGAGAATCGTACTTTGCTTTTATAAATACATCATAGTCC
TGCAAGCAGTCAATTTAACATCATTCGGTTGCTATCAATCGCAATGGCAGGGACATTATTTAGTTCTATGTTACTAGCAAGCCAAGTGTACTATTTTTGT
CTAACAGAATTCATTCAAGAAGATAGCAAAACTATCATAAACTACAGGTTACAGCTATCCTATTTGGGACACTAAGCTATACACTTATCCTATTTTTCTA
TTCAGAATGGCATACCTTCTCTGTTCATACAATATTCTGCTTAAATTAGAATTTTTCGTGCAAGCAATACATTTAATATTTTACTACGCAAATCAGTTTC
AGTACAAGGGATAGTATGTTTTCCTATGCATCTGCCAACCATCACTGCCATCTATTTTGTCTAATTAATTTTCTTTGTTCTCTCTACAAGGTTTACCTAA
TCAGATGATAAGGTAAAACAACTCTTCTTGTATTTCATAGTCGGCACTCAAGTTGCGACTCGTAGACTAGTATGTCGACTAGTTGCTCGGCTCGTAATCA
GTGGAGAGAACACATAGCATCATATGTTTTTCCCATTAAATCCTCTAGGGGAAAGGCATTGTAAGTTTCCATGTGTTGTGCAGAAGAAGAAAAGTTGGCC
GAGCCCAACAGCAAAATAGCAATCTTTGTACCTTTGTCTATTGATTAGCACAATGAACTATATCAATGAACTTGATCAGATATTATTTCCTTGAGACAGA
GTTAGTGCAACGAACTATATCAATGAACTCTTTACTTATCATTGAATTATCTTATTTGTTTGCAGGAACATATTCTTATGGGTGGTCATGGTCTGCTCGT
TGATGGGCACAAACAAGTAATTGAGGCTCTCGCTCAAGGTCTTAATCAGAGTTGTAGATACTGTAAATACTTGGCCTGACCAACTCAAGGTCTTGACACC
CCTCTCAATCAGAGGTGTAAATACTTGGCCTTACTAGAATAGCAGATAATTATCCTGACCAACAACACATGTACATGTTGACTTAGGTGTTCTGCTAGCT
GTACGAAACATTAGCTATGTTTCTTCTTGAATTCTGGCTTGAAATAGACCATGAGTCTGTAATTGAACAAGAATCTGATGTGTACATTGAATTTTGGTAG
CAATTTATAATTTTGAATTATGGCCC