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Detailed information on CNT30657929


BLAST search results

BLAST vs Swiss-Prot:
sp|Q19VB1|RK16_CHLAT, E-value = 6e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30183531Triticum dicoccoidesSecale cereale40.1186.5791.97361forward
CNT30287494Triticum dicoccoidesTriticum aestivum85.1183.5399.74766forward
CNT30385899Triticum dicoccoidesTriticum turgidum85.1182.45100766forward
CNT30435180Triticum dicoccoidesAegilops tauschii4015.4895.56360forward
CNT30720303Triticum dicoccoidesTriticum spelta35.4466.0599.69319forward

Expression of CNT30657929

Peptides detected in this lncRNA

>peptide 1 (73 aa)
ERDGCSHLVFFSLSPEDERRVAAQPSPSSLPRSAAQHAPPPLPPVDGHWTFRRLTLSKTKLVFSSEADLDLAL*

>peptide 2 (69 aa)
QKEMAVRIWSSSPSLLKMSAASPPNPLPPPFPDLRPNTPRLLSPLLMDTGPSVVLPCPRPNSSSHLKPI*

Sequence

>CNT30657929
CAGAAAGAGATGGCTGTTCGCATTTGGTCTTCTTCTCCCTCTCTCCTGAAGATGAGCGCCGCGTCGCCGCCCAACCCTCTCCCTCCTCCCTTCCCAGATC
TGCGGCCCAACACGCCCCGCCTCCTCTCCCCCCTGTTGATGGACACTGGACCTTCCGTCGTCTTACCCTGTCCAAGACCAAACTCGTCTTCTCATCTGAA
GCCGATCTAGATCTTGCTCTCTGACCGGTTCCCAGGCGGGCGTCCCTCTGCTTCCTGTCCTTGCACTTTGACGGGTACCCAGGTGCGTGTCCCTGTTCTT
TTGCTCCGACGGCCAGCTGCCCAGAAGTTCCCCTGCTTCCTCTTCGATTGGCAGCCAAACGGCACATAACTGCGAGCATGGTAGCGTGTGAAGGTACAAG
ACGGTCTTTGCAAGACATCAGGCTCTGCTCCAGCTATTGATATCCATTTTCAGCACTTGAACCCGCTTGGATCACGGCAAGACAGATAGAAGCAGGATGA
AGAGCAATAACATGATATGCACGTCGTGGTGGAAAAATATGGGAACATATTCTTACGGGTGGTCATGGTCTGCTGGTTGATGGGCACAAACAAGTAATTG
AGGCTCTCGCTCAAGGTCTTAATCAGAGTTGTAGATATTGTAGATACTTGGCCTGACCAACTCAAGGTCTTGACACCCCTCTTAATCAGAGGTGTAAATA
TTTTGCCTTACTAGAGTAGCAGATAATTGTCCTGACCAACAACACATGTACATGCTGACTTAGGTGTTCTGCTAGCTGTACGAAACATTAGCTATGTTTA
CTTGAATTCTGGCTTGAAATTGACCATGAGTCTGTAATTGAACAAGAATCTGATGTGTACATTGAATTTTAGCAGCAATTTATAATTTTGAATTATGGCA