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Detailed information on CNT30184478


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30435180Secale cerealeAegilops tauschii76.0978.2593.411820forward

Expression of CNT30184478

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVNVLSPIDFLDTRPIVILPCPYQTRPLI*

>peptide 2 (36 aa)
MCVSLFFCSDGQLPRSSSTSSSIGSQTAHNCEHGSV*

>peptide 3 (50 aa)
MWSTFDLVQNTGHGILKVLSYEPMLMQYSCITATDVIVSVVDLTRIAKLK*

>peptide 4 (40 aa)
MQISFSTRDSMFSYASANHHYHLFCLINFLCPLNMVYQIR*

>peptide 5 (45 aa)
MKLIRYYLLETELVQGTISINSLLIIELSSLFAGTYSYGWSWSAR*

Sequence

>CNT30184478
GCACGCCCCACCTCCCCTTCACCGTGTCGATCCCTAGCCTAACCACCATTGCGGCGCCGACCGTGGTGAGCATGGCGCGCCGTCCATAGTCACAGCACCG
CGCCGCCGGTCCGGATCGCCGGGTTGCGACGGCCATGTGACCTCGCATCATGGTGAACGTGCTATCCCCTATCGATTTTTTGGACACTAGACCTATCGTC
ATCTTACCCTGTCCATACCAAACTCGCCCTCTCATCTGAAGCCGATCTAGATCTTGCTCTCTGACCGGTCCACAGGCGGGTGTCCATGTGCGTGTCCCTG
TTCTTCTGCTCCGACGGCCAGCTGCCCAGAAGTTCCTCTACTTCCTCTTCGATTGGCAGCCAAACAGCACACAACTGCGAGCATGGTAGCGTGTGAAGGT
ATCCTTCTCTCTATAGATTTGTTGAATACTTTATAGGACTATTTAGGATGAATGAATGTTGAAATCAGTGTGCTATAGGCTGTAGTTCAATGAGATGTAT
AGGAAGACTAGTTGATGAGTAACAATATGATTTGAGGCTAACCCTTTTTCTGTTTCTGAATATCTGATTTAGTACAAGGCCGATAATTGATAGGTACAAG
ATGGTCTTTGAAAGACATCAAGCTCTGCTCCAGCTATTGATATCCATTTTCTGGTGAAAAGAAATATCTAAGATGGTAATTAATATCCAAGGTTATGTTT
TGGGGAACAATTTGTTGTTGAAAACATCGCTGCTTAATTTGTGATCATGTGGAGCACATTTGATTTAGTACAAAATACAGGTCACGGGATTCTGAAAGTT
CTATCATACGAACCAATGCTCATGCAATATAGTTGTATTACTGCTACAGATGTGATCGTCTCTGTTGTAGACTTAACACGAATAGCTAAACTGAAGTAGG
TAACTAAGTATGCATAGTTAGCAAACTGACTAGCTATCTGACATGTGTTCCCTATACATTTAATGTGCTCTATTAGCTACTAACTGGTTCCAGCTGATTT
ACTTCATTTTGTACACAAGAAATACTATCTTATTATAGAAAAATCACAAAACAAACGATAATTAAATATTTGCCAACCCTCTTCTTATGTAGTTGATTGG
TTCACAGTGATAACAGCGCCGCCAACTGCCCTGAAGAACTGTGAAGTGTCATGGAACTTACATATTCCTTTTTTATACAGAACTATTGTGTGTTGTATAA
ATACCACATTATCATGCAATTATTATAGAGAATTGTACTTTGCTTTTATAAATACATCACAGTCTTGCAAGCAGTCAATTTAACATCATTCGGTTGCTAT
CAATCGCAATGGCAAGGACATTATTTAATTCTATGTTACTAGCAAGCCAAGTGTACTATTTGTGTCTAACATAATTCGTTCAGGAAGATAGCAAAACTAT
CATAAACTGCAGGTTACAGCTATCCTATTTGGGACACTAAGCTATACACTTATCCTATTTTTCTATTCATAATGGCATACCTTCTCTGTTCATAAAATAT
TCGGCTTAAATTAGAATTTTTCGTGCAAGCAATACATTTAATATTTTACTATGCAAATCAGTTTCAGTACAAGGGATAGTATGTTTTCCTATGCATCTGC
CAACCACCACTACCATCTATTTTGTCTAATTAATTTTCTTTGTCCTCTCAACATGGTTTACCAAATCAGATGATAAGGTAAAAGAACTCTTCTTGTATTT
CATAGTCGGTACTCAAGTTTCGACTCGTAGACTAGTCTGTCAACTAGTTGCTCAGCTCGTAATCAGTGGAGAGAACACATAGCATCATACGTTTTTCCCA
TTAAATCCTCTAGGGGAAAGGCATTGTAAGTTTAGCTCATTCCATGTGTTGTGGAGTAGAAGAAAAGGTGGTCGAGCCCAATAGCAAAACAACAAGCTTT
GTACCTTTGTCTATTGATTAGCACAATGAACTATATCAATGAAATTGATCAGATATTATTTGCTTGAGACAGAGTTAGTGCAAGGAACTATATCAATCAA
CTCTTTACTTATCATTGAATTATCTTCTTTGTTTGCAGGAACATATTCTTACGGGTGGTCATGGTCTGCTCGTTGATGGGCACAAACAAGTAATTGAGGC
TCTCGCTCAAGGTCTTAATCAGAGTTGTAGATACTGTAGATACTTGGCCTGACCAACTCAAGGTCATGACACCCCTCTCAATCAGAGGTGTAAATACTTA
GCCTTACTAGAATAGCAGATAATTATCCTGACCAACAACTTAGGTGTTCTGCTAGCTGTACGAAACATTAGCTATGTTTACTTCTTGAATTCTGGTTGAA
ATTGACCATGAGTCTGTAATTGAACAAGAATCTGATGTGTACATTGAATTTTGGTAGCAATTTATAATTTTGAATTATGGCCCAGAATTTAA