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Detailed information on CNT30433768


BLAST search results

BLAST vs Swiss-Prot:
sp|P17784|ALFC1_ORYSJ, E-value = 0.0

BLAST vs NONCODE:
NONPOPT000956, E-value = 2e-76

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522989Papaver somniferumSetaria italica27.843.8178.62407forward
CNT30641234Papaver somniferumNymphaea colorata12.9131.7179.89189forward
CNT3021376Papaver somniferumCitrullus lanatus16.1234.0581.78236forward
CNT30609114Papaver somniferumGossypium raimondii18.9942.981.29278forward
CNT30113854Papaver somniferumFicus carica27.2556.2881.45399forward

Expression of CNT30433768

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MSCVPSTKISGSTIGTKPFSWQMMAYLAKPLAFSLMANCDGSLGPIFRTARHLANLAPAA*

>peptide 2 (48 aa)
YSTTIASKKTNNKQETKKSEDCLKWENFKKPRKYLLKELKKFNMNKKS*

>peptide 3 (38 aa)
TRQLLLQRKQTTSRKQKKVKTASNGKTLKSPVNICSKS*

Sequence

>CNT30433768
TACTCGACAACTATTGCTTCAAAGAAAACAAACAACAAGCAGGAAACAAAAAAAAGTGAAGACTGCCTCAAATGGGAAAACTTTAAAAAGCCCCGTAAAT
ATTTGCTCAAAGAGCTAAAGAAATTTAACATGAACAAGAAATCATAAATTTGAAAGATAAAGTTCAAAGGGAGACGTTTCTCAAACTCAGCATTGTGTGT
CATGAAACTCCCGTAAATTATTTGCAACAGCATCCGTTTCTTCATCACTCACTCTAAATAAAAACCACTAAACTCTAAAAATCCAAAGAGAAGAGATACT
TCATCCTGATTCCCCACTATACCATGTTCTTTTAACACATCAAAATAGCAAACTAAAATCAGAATAAAAGGACAAGATTATCAGAGAGAAACCACAACCT
CATCTAGTTGATTGATTAGTAGGTGTAGCCCTTAACGTGAAGGCTCTCTGCAGCACCTTCTCCAACTGGAGCATCACCCTTGTAGGTACCCAAAGTAGCT
TCAGAGTTAGCCTTGCACCTTGCGAGGAAAGCTGCTTGTGCCTTCTCAATGTTCTCGTCCTTTCCTGACCACGCCTTGAGGGTACTTTGTTGAAGAGCAC
GACCGAAGGAGAAAGATAGTGACCATGGCTTCTTGGCCTTGAGCTGGTTCATTGCGTTAAGGTTTCTGGTTGCTTCCTCCTCACTTTGTCCACCTGACAA
GAAAACAACAGCTGGAACAGCTGGGGGCATGGTCCTCTGAAGAGCACGGACGGTGTACTCAGCAATCACTTCTGGAGCAACCTTCTTGGCTTCAGAACCT
GGGGTAACCATGTTGGGCTTCAATAGAGTTCCCTCAAGAAGAACCTTGTGGTCGTTCAAAGCCTTGTAGCAAGCTGCAAGAACTCTCTCGGTAACATCAG
CACATCGGTCAATGTCGTGTGTTCCATCAACCAAGATTTCAGGCTCAACAATTGGCACCAAACCATTCTCTTGGCAGATGATGGCATATCTGGCCAAACC
GTTAGCATTCTCGTTGATGGCCAATTGTGATGGCTCGTTGGGGCCAATCTTTAGAACTGCACGCCACTTAGCAAATCTAGCACCAGCTGCGTAGTATGTA
GCACATCTCTGGGCAAGGCCATCAAGACCCTGAGTGGTGGTCTCACCGTTGGTTCCGGCAAGTTCAACGGTACCCTTGTCAACCTTGATACCTGGAAGGA
CACCACCTTCCTTCATGACATCAACGAACATCTTACCAGCAGCAGTCTTTTGGTATAGAGTCTCTTCGAAAAGGATAACACCACTTAGGTATTGAAGACA
TCCAGGGGTGCAGAAAAGAAGCTCACGAAGAGCACGTCTGTTGGACTCAACGTTCTCAACATTGATGCTTGATAGACGCTTTCCAATGGTACCGGTAGAT
TCATCAGCAGCAAGGATACCCTTTCCAGGGGTACCAATGTAGGCAGCATTGGCAATCAATTCAT