Detailed information on CNT3042841


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 3e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530597Prunus dulcisEucalyptus grandis32.7535.4384.41186forward
CNT30267382Prunus dulcisChenopodium quinoa21.34.1582.64121forward
CNT3070262Prunus dulcisQuercus suber23.7754.6682.96135forward
CNT30709697Prunus dulcisGlycine max30.2833.7382.56172forward
CNT3090559Prunus dulcisSolanum tuberosum39.7932.2480.97226forward
CNT3087387Prunus dulcisVigna radiata23.428.0981.95133forward
CNT30620387Prunus dulcisCajanus cajan43.4934.9479.35247forward
CNT3025596Prunus dulcisPopulus trichocarpa50.754.6582.99288forward

Expression of CNT3042841

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MMIVHVSTRSSRVCILGHQGSSFLSPWPSSTSSFHQDWSSVSS*

>peptide 2 (52 aa)
MAFLYKLLPPGLEFGVFLNYVISLVVERAIVFNPSFNCKPDFNPINGIWIVLD

>peptide 3 (52 aa)
SISASFFPNLSKAFNGSVSVVHSGVSLCPKYTSSVECLDRISIRAMPSTVCS*

>peptide 4 (35 aa)
PQFQPVSFQIYQRLSMVLCLLSIQECLSAPNTLHQ*

>peptide 5 (38 aa)
LNFSQFLSKFIKGFQWFCVCCPFRSVSLPQIHFISRMP*

Sequence

>CNT3042841
CCTCAATTTCAGCCAGTTTCTTTCCAAATTTATCAAAGGCTTTCAATGGTTCTGTGTCTGTTGTCCATTCAGGAGTGTCTCTCTGCCCCAAATACACTTC
ATCAGTAGAATGCCTTGACAGAATTTCAATAAGGGCAATGCCAAGCACTGTCTGCAGCTGAGCGGTAATTGTTTTCAAGAAAACTGTATCAGGGCTGGAT
TCGAGCTCTTTGTACTCAGGAGTTCCCTTCTCAGGCATGAATTTTCGGCTTATAGTAGGGCGGTTGGGGAGGTAGCCTGCATAAGGGTACTGTCCAAAGT
TGACAGCTGCATGGAGAGCAGAAGCAGTCCATATGATGATAGTGCATGTTTCTACTAGGTCTTCGCGAGTCTGCATTTTAGGCCACCAGGGCTCATCTTT
TTTGTCACCATGGCCTTCCTCTACAAGCTCCTTCCACCAGGATTGGAGTTCGGTGTCTTCTTGAATTATGTCATCAGTCTTGTAGTAGAAAGAGCAATAG
TCTTCAACCCAAGTTTTAATTGCAAACCAGATTTCAATCCCATCAACGGCATATGGATAGTCCTCGAT