Detailed information on CNT30530597


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020541Eucalyptus grandisCitrullus lanatus9.5220.339450forward
CNT3042841Eucalyptus grandisPrunus dulcis35.4332.7584.41186forward
CNT30704118Eucalyptus grandisPrunus avium46.8630.3781.71246forward
CNT3031620Eucalyptus grandisTheobroma cacao26.6732.0480.71140forward

Expression of CNT30530597

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LDFSQLLPEPLERLQRLSICCPLRSVSLPKIHLVSRMHRQDLYD*

>peptide 2 (43 aa)
MVIVHVSVRSFTVCILGHQGSSFLSPCPSSTSSFHQDWSSSSF*

>peptide 3 (50 aa)
STSPNFFPNLSNASNGSASAVHSGVSLCPRYTSSVECIDRISMIEIPRSV*

>peptide 4 (37 aa)
MSLLHEFLPPGLEFLVLLNRLVTLVIKGAVVLNPRLDR

>peptide 5 (35 aa)
PRLLPTSSRTSRTPPTAQHLLSTPECLSAQDTPRQ*

Sequence

>CNT30530597
CCTCGACTTCTCCCAACTTCTTCCCGAACCTCTCGAACGCCTCCAACGGCTCAGCATCTGCTGTCCACTCCGGAGTGTCTCTCTGCCCAAGATACACCTC
GTCAGTAGAATGCATCGACAGGATCTCTATGATTGAAATTCCTAGAAGTGTCTGAAGCTGGGCTGTTATAGTTTTCAGGAAAGCCTTGTCAGGATTTTGC
CTGAGCTCTTCGAATTCGGGAGTACCCTCCTCGGGCATATAGCGACGGCTGAGGGTGGGCCTGTTCGGGAGGTACCCTGCGTAAGGGTATTGCCCGAAGT
TCACAGCCGCATGGAGAGCAGACGCGATCCAGATGGTGATCGTACATGTCTCTGTTAGGTCCTTCACAGTCTGCATTTTAGGCCACCAGGGCTCGTCCTT
CTTGTCGCCATGTCCCTCCTCCACGAGTTCCTTCCACCAGGATTGGAGTTCCTCGTCCTTCTGAACCGTCTCGTCACTCTTGTAATAAAAGGAGCAGTAG
TCCTCAACCCACGTCTTGATCGCAG