Detailed information on CNT30709697


BLAST search results

BLAST vs Swiss-Prot:
sp|P24095|LOXX_SOYBN, E-value = 4e-94

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042841Glycine maxPrunus dulcis33.7330.2882.56172forward
CNT3087387Glycine maxVigna radiata91.3728.3684.98466forward
CNT30144643Glycine maxMedicago truncatula46.8647.880.75239forward
CNT30704118Glycine maxPrunus avium26.6716.7985.29136forward
CNT3031005Glycine maxTheobroma cacao25.122.984.38128forward
CNT3025596Glycine maxPopulus trichocarpa21.5720.8782.73110forward

Expression of CNT30709697

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AVIFPSISASLLPNFLNASNAFESDVQLGLSLSPR*

>peptide 2 (28 aa)
MTLLNNFLPPSLEFRVFLNCIICGIVQGN

Sequence

>CNT30709697
CGCTGTGATTTTTCCCTCAATTTCTGCCAGCTTGCTTCCAAACTTTTTGAATGCTTCTAATGCCTTTGAATCAGATGTCCAATTAGGATTGTCTCTCTCC
CCAAGGTAGATCTCATCAGAAGCATGCCTTGACAATATCTCTATCACCGTAAGATCAATAATGGTTTGGCGCTTCGGTGTAATGGTTCTCAAATAAGCCG
TTTGGGGACTCTCCACCATCTCATCATATTCTTTGGTTCCTGGTTCTGGAATCCATCTTCTGCTAAGAGTTGGACGGTTTAGGATAAAACCACCATAAGG
GTATTGTCCAAAATTAACAGCTGCATGGAGAGCTGAAGCAATCCATATGATAGTAGAACATGATTGAATAAGCTCTTGACGAGTCTGCATTTTAGGCCAC
CAAGGCTTGTCTTTTAAGTCACCATGACCCTTCTCAACAACTTCCTTCCACCAAGCTTGGAGTTCAGAGTCTTTCTTAACTGCATCATCTGTGGCATAGT
ACAAGGAAAC