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Detailed information on CNT3090559


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 2e-145

BLAST vs NONCODE:
NONSTUT002800, E-value = 9e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550019Solanum tuberosumIpomoea triloba25.8233.2182.32181forward
CNT3042841Solanum tuberosumPrunus dulcis32.2439.7980.97226forward
CNT3031084Solanum tuberosumTheobroma cacao38.2353.9280.6268forward

Expression of CNT3090559

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MVQESMSSCTVCILGHQGSSFLSPCPSSRSSFHQAWSSVSFCTASSDL*

Sequence

>CNT3090559
GTATATGGAACTTTAACAGGCCCTGACCTGTTCTTCCATTTTTTATGATCACTATTCATCTGTAAAATCTGATTCCCGATATCACTCAGCTTCTTTCCAA
ACCTCTCAAAAGCTAAAAGTGGTTCTTGATCCTTTGTCCATTCAGGTGAGTCCCTCTGTCCGAGGTAAAGTGTATCCGAAGAGTGCCTTGACAAGAGCTC
TATGAGGGAAATTCCAACCAATGTCTGCAGCTGAGGAGTGATTGTTTTGAGGAATACATTGTCTGGATTTGTCTTGAGCTCTTCATACTCTGCACTTCCT
GGCTCTGGCATGAATTTCCGGCTTAATGTAGGGCGATTAGGGAGATAACCAGCATAAGGGTATTGCCCAAAATTAACTGCTGCATGAAGTGCTGAAGCTA
TCCATATAGTGATGGTGCAGGAATCTATGAGCTCTTGCACAGTTTGCATTTTAGGCCACCAAGGCTCATCTTTCTTGTCGCCATGTCCTTCTTCGCGGAG
CTCCTTCCACCAGGCTTGGAGTTCAGTGTCTTTCTGTACCGCGTCATCTGATTTGTAATAGTAGTTGCAATATTCTGTTACCCAACTTTTGATTGCTGAC
CAAATTTCCAACCCATCAACAGCATATGGATAGTCCTGAATCAGTAAGCGAACGCCATGTGGGGAGCTTGAGTCCTCAACAGCCACTCCCCTGATTTTGA
G