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Detailed information on CNT30426787


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT001703, E-value = 3e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672753Papaver somniferumSetaria viridis43.3854.281.8478forward
CNT30618428Papaver somniferumSesamum indicum15.735.0986.71173forward
CNT30564008Papaver somniferumActinidia chinensis43.2862.6885.53477forward
CNT30539604Papaver somniferumBrassica napus22.3228.7789.02246forward
CNT3052982Papaver somniferumAmborella trichopoda40.2933.9484.01444forward

Expression of CNT30426787

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MMMTWEVKLAASLAGSSFELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTV

>peptide 2 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 3 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKPETKMTTTEVNKTKPFCRPS*

Sequence

>CNT30426787
TACGAGTAAAAGACATTTAATAAAGAAAAAAACAAGACATTAACTAGAACACTGTTTTCATTTAACTGGGAAAGAGAGATGCAAATAAAAAGTTGTTAAC
AGCAACTTACAAACCAAAATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGAT
GCTCAACAAAACAAAGGCAACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACCAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAA
AACCATTCTGCAGACCCTCTTAGCACCATCCCTGTACTCACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCGGTTGGGTCCT
TCTTCTCAACCCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGATACTGAGCGAAGGTCTCTACAAC
CATGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCGATCTTG
GTTTGGATCTCAGCAAACTTAACAGCAATGTGAAGTTGGCAGCTTCCCTGGCTGGGTCATCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTT
CACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAA
CCGGTGGGTCCAAAGGTAACAACCATACCAGGATGGTTCATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCCCTGGCAGGGTCATCCTTTGAGTTGG
AGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCAT
CTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAGGTAACAACCATACCAGGCTTGATGACTCCGGTTTCAACACGTCCAACTGGCACAGTT
CC