Detailed information on CNT30618428


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30385905Sesamum indicumTriticum turgidum29.8227.0784.35147forward
CNT30539604Sesamum indicumBrassica napus29.0116.7389.51143forward
CNT30146188Sesamum indicumMedicago truncatula35.0922.0490.17173forward
CNT30721807Sesamum indicumTriticum spelta33.2718.2486.59164forward
CNT30426787Sesamum indicumPapaver somniferum35.0915.786.71173forward
CNT30644842Sesamum indicumCannabis sativa31.8538.8685.99157forward
CNT30116376Sesamum indicumOryza nivara29.4126.789.66145forward

Expression of CNT30618428

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MSRAKQQQNSLGTLLRCSLAKRPRGGYSEKVSTTMGLVGTILTRPASPFFKNLGSFSSSLPDRLSILVTSSANLTA

Sequence

>CNT30618428
AACCAAGATAAGCAAATAAAAGAAACTAGTTTGCCGCATCATTGTAAACTTAATAGAATCCATTCAAATATAATTTAACATAACATGTACCAATGCCGTA
AATCTCGCCACCGCCTATCAAGTACCCAATTCTGAGAATGGCTACCCAACATAGAAGGCAGAAAAATACAGCATGGCAAGCAATTTAACAGTCTCAATAG
AGCATTCGAAAAGAAAATAAAGTTTCTAAGACACAAATTAAGAATATAAAATTTTCTGTAGCCATGAGCAGAGCCAAGCAGCAGCAAAATTCACTTGGCA
CCCTTCTTCGCTGCAGCCTTGCAAAACGACCAAGAGGTGGGTACTCGGAGAAAGTCTCCACCACCATGGGCTTGGTGGGAACCATCTTAACAAGACCAGC
ATCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTACCAGACCGCCTGTCAATCTTGGTCACAAGTTCAGCAAACTTAACAGCAAT