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Detailed information on CNT30329500


BLAST search results

BLAST vs Swiss-Prot:
sp|O22342|ADT1_GOSHI, E-value = 3e-67

BLAST vs NONCODE:
NONATHT001826, E-value = 3e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618446Dioscorea rotundataSesamum indicum21.615.1480.95126forward
CNT3020919Dioscorea rotundataCitrullus lanatus38.9428.2780.18227forward
CNT3041636Dioscorea rotundataChlamydomonas reinhardtii11.322487.8866forward

Expression of CNT30329500

Peptides detected in this lncRNA

>peptide 1 (36 aa)
PIDQSMCKLVITFFYLGIHQKNFFSKMAQKQLTKSK*

>peptide 2 (47 aa)
MRKSMAKLAKPFSAGAWAKTGETDGTIERSQVALYGCIKGFCSAPLT*

Sequence

>CNT30329500
CACCCATAGATCAATCAATGTGTAAGTTGGTAATAACATTTTTCTATTTAGGTATCCACCAGAAGAACTTTTTCAGCAAGATGGCACAAAAACAACTAAC
CAAATCAAAATAACAGAAAGATGCTAACTAACATTTAACTCACCTGAGTTGGGAAATAACGAATCACATTTGCAGTATTTCCCCTCCACAATGAAGCAAA
ACCTTCATCCTTGATCGTGCGAGCAAAGCAATCCGAGATTCCCTTGTAAGGCTCAGAAAGACGACCGGCCTTGATCATTTCATCCTGATTCTGGATAAGA
AGCTTCACACGTTCAATAGGAGCTGCCGCTGTCTTCGAAACAGCAGCAGACACACCACCCATGAGAAAGTCTATGGCAAAGCTAGCAAAACCTTTCTCTG
CAGGTGCATGGGCAAAGACAGGTGAGACCGATGGCACCATTGAAAGGTCACAGGTCGCCTTGTACGGCTGCATCAAAGGATTCTGCAGTGCCCCATTAAC
ATAATTCCCAGTTGTGAAGCGCCTTGCATACAGTGAAGGGGAATAAAAGCTTTGATTGCAAGCCTTCAAATCTCGGGAAAAGC