Detailed information on CNT30385452


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520455Triticum turgidumSetaria italica104.8744.5590.3237forward
CNT30282763Triticum turgidumChenopodium quinoa50.4414.3284.21114forward
CNT30708688Triticum turgidumGlycine max95.5859.578.7216forward
CNT3044098Triticum turgidumPrunus dulcis22.129.569250forward
CNT30681050Triticum turgidumTriticum urartu103.5410094.87234forward
CNT30619887Triticum turgidumCajanus cajan21.2418.5389.5848forward
CNT30580716Triticum turgidumEchinochloa crusgalli10086.5993.36226forward
CNT30556637Triticum turgidumPanicum hallii98.67101.8393.27223forward
CNT30725037Triticum turgidumLupinus angustifolius21.245.691.6748forward

Expression of CNT30385452

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPILVSSSGMKMPAAPSIAHRQCTSSACTFHRKLSGSD

>peptide 2 (74 aa)
YPTSVPVSLLLGKMGSGGGVGEVLLLPGGVPRRCVEDADLGQQLRDEDARRAQHRPPAVHQLRLHVPPQALRVGS

Sequence

>CNT30385452
GTACCCGACGTCGGTGCCGGTGAGCTTGTTGTTGGGGAAGATGGGGTCGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGTGTACCACGACGG
TGTGTTGAGGATGCCGATCTTGGTCAGCAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCCGCCTGCACGTTC
CACCGCAAGCTCTCCGGGTCGGATCC