Detailed information on CNT30681050


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 3e-46

BLAST vs NONCODE:
NONBNAT006615, E-value = 5e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520455Triticum urartuSetaria italica10043.9894.44234forward
CNT30282763Triticum urartuChenopodium quinoa32.489.5584.2176forward
CNT30385452Triticum urartuTriticum turgidum100103.5494.87234forward
CNT30612607Triticum urartuArabis alpina67.5229.3181.65158forward
CNT30131664Triticum urartuLolium perenne102.5698.7793.33240forward
CNT3053136Triticum urartuAmborella trichopoda61.1132.583.22143forward
CNT30580975Triticum urartuEchinochloa crusgalli10097.9194.44234forward
CNT30556637Triticum urartuPanicum hallii100106.8588.89234forward

Expression of CNT30681050

Peptides detected in this lncRNA

>peptide 1 (77 aa)
PDVGAGELVVGEDGLHDEEGGGVGEVLLLPGGVPRRCVEDADLGQQLRDEDARRAQHRPPAVHQLRLHVPPQALRVGS

>peptide 2 (76 aa)
PTSVPVSLLLGKMGSTMKRVVVSVKYSCSPAVYHDGVLRMPILVSSSGMKMPAAPSIAHRQCTSSACTFHRKLSGSD

Sequence

>CNT30681050
CCCGACGTCGGTGCCGGTGAGCTTGTTGTTGGGGAAGATGGGCTCCACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGTGTAC
CACGACGGTGTGTTGAGGATGCCGATCTTGGTCAGCAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCCGCCT
GCACGTTCCACCGCAAGCTCTCCGGGTCGGATCC