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Detailed information on CNT30718122


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618209Malus domestica goldenSesamum indicum55.0227.0786.47170reverse complement
CNT30382474Malus domestica goldenManihot esculenta30.130.6988.1793forward
CNT30588944Malus domestica goldenMusa acuminata36.8934.5585.09114reverse complement
CNT30239280Malus domestica goldenBrassica oleracea18.4520.887.7257forward
CNT3030049Malus domestica goldenTheobroma cacao30.7430.9488.4295forward

Expression of CNT30718122

Peptides detected in this lncRNA

>peptide 1 (62 aa)
SSLATQACNPSGDIKVLGRWFCLKPAGSDVALFWPAHSKLGVGPWSLGEGLGSLVPRVESTA*

>peptide 2 (73 aa)
MWLFSGPPIPSWELGRGAWAKAWAPWFLEWRAPRKAGFTEQRSFPALGGGRITGRCHLDPSWPARQSRLNQHVF

Sequence

>CNT30718122
GTCGAGCTTAGCAACGCAAGCTTGTAACCCGAGTGGGGACATTAAGGTGTTGGGACGCTGGTTCTGTCTTAAGCCGGCCGGGTCCGATGTGGCTCTTTTC
TGGCCCGCCCATTCCAAGCTGGGAGTTGGGCCGTGGAGCTTGGGCGAAGGCCTGGGCTCCCTGGTTCCTAGAGTGGAGAGCACCGCGTAAGGCTGGCTTC
ACAGAGCAACGATCATTTCCCGCTCTCGGCGGTGGAAGGATAACAGGTCGGTGCCACTTGGATCCATCATGGCCCGCTAGGCAGTCCCGATTGAACCAAC
ACGTTTTTT