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Detailed information on CNT30381284


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 6e-153

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641434Manihot esculentaNymphaea colorata72.0964.484.75682forward
CNT30615929Manihot esculentaSesamum indicum68.3919.3484.54647forward
CNT30279021Manihot esculentaChenopodium quinoa70.9351.4685.39671forward
CNT3087979Manihot esculentaVigna radiata72.8373.2285.49689forward
CNT30327242Manihot esculentaAsparagus officinalis72.368.7484.8684forward
CNT30723701Manihot esculentaLupinus angustifolius73.1539.4183.82692forward

Expression of CNT30381284

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVLTNICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30381284
TGAATCGTAATTCCAGAATATTATATTGGCAAGTCAAGCCAACTTTATTAACCCTTGAAGTAAAAGTACCAATGACCTTATAGCGGCCATTTCAAAAGCT
TTAGTAAAGTACTCGCAACCATTCCAAAATAACAAGTCTTGGAGGTTTAAAAACTTATTTAAAGCCATTAAGGCAAGGCATTACTAGTAGCTATTAAGAA
CATACTAGACACAACCAAAACTCAGAAACCACCGCGAAGGCGGAGGACAAGGTGCAAGGTAGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCTTCCA
TCCTCAAGCTGCTTTCCAGCGAAAATCAATCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCAATAGTATCCGAAC
TCTCTACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTCACAAAAATCTGCATTCCACCACGAAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTG
GATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCTTCTTTGTCCTGAATTTTG
GCCTTGACATTGTCAATGGTGTCCGAACTTTCAACCTCCAAGGTGATTGTCTTCCCTGTAAGGGTCTTAACAAATATCTGCATGCCACCACGAAGGCGGA
GCACCAGGTGGAGGGTGGACTCTTTCTGGATATTGTAGTCTGCAAGTGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGG
TGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCCAGGGTGATTGTCTTTCCGGTTAGGGTTTTCACG
AAGATCTGCATCTGTTAGCCAGAAAGAAATCAAATTAACGTCAGTT