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Detailed information on CNT30327242


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 7e-158

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641434Asparagus officinalisNymphaea colorata68.5464.486.66682forward
CNT30727227Asparagus officinalisCorchorus capsularis68.7459.5385.09684forward
CNT30381284Asparagus officinalisManihot esculenta68.7472.384.8684forward
CNT30630785Asparagus officinalisVigna unguiculata68.2479.685.27679forward
CNT30712823Asparagus officinalisGlycine max68.3477.185.29680forward
CNT3045767Asparagus officinalisPrunus dulcis68.3446.3285.88680forward
CNT30562217Asparagus officinalisActinidia chinensis68.3467.5384.71680forward
CNT30588982Asparagus officinalisMusa acuminata62.6172.6185.39623forward
CNT30153579Asparagus officinalisPrunus persica68.3442.9385.29680forward
CNT3026462Asparagus officinalisPopulus trichocarpa68.7475.585.09684forward

Expression of CNT30327242

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVIVFPVSVFTKIC

>peptide 2 (61 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVMVFPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 3 (52 aa)
MSLCWSGGIPSLSWILAFTLSMVSELSTSKVIVFPVRVFTKICIPPRSLSTR*

Sequence

>CNT30327242
ATGGAGCAGGAAACTTGCGAGCCAAAACGCACCTCAGCATTAAAACGATACGCACATACGTGACCAGCAGCAAGCAATACCAACAATAGCCACACGCAAA
CTTAAAATAAAGAAAACATATTTGAACCACGCAGTCAATTCCAAACAACCACAACCAAGTTCATAAGTAGCACACAACTAGAGCACGTCCATAAAACCAA
ACTAGAAGGCCTCCACACACGCAAGGTGATGGAGCGCATTATTCACAAGCACTGTGCTGAAACAACGAAACCACCGCCGGAAACTTGACTGATCATCATC
TAGTTTTGAGCACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTCC
CTGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATGGTATCCGAGCTCTCCACCTCCAAAGT
GATCGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCATACCACCACGAAGCCTGAGCACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCT
AGAGTGCGGCCATCCTCGAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTGTCAA
TGGTATCCGAGCTCTCCACCTCAAGAGTGATGGTCTTCCCCGTAAGAGTCTTGACAAAAATCTGCATGCCACCCCTGAGACGGAGCACAAGGTGGAGGGT
GGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCATCCTCGAGTTGCTTTCCTGCGAAAATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTG
TCCTGGATCTTGGCTTTGACATTGTCAATAGTGTCTGAGCTCTCCACCTCAAGGGTGATAGTCTTTCCTGTAAGTGTCTTCACAAAGATCTGCAT