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Detailed information on CNT30641434


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-157

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-141

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381284Nymphaea colorataManihot esculenta64.472.0984.75682forward
CNT30712823Nymphaea colorataGlycine max63.7476.5385.63675forward
CNT30143311Nymphaea colorataLolium perenne64.5969.388.6684forward
CNT3067391Nymphaea colorataLeersia perrieri64.4932.0885.65683forward
CNT30327242Nymphaea colorataAsparagus officinalis64.468.5486.66682forward
CNT30330418Nymphaea colorataDioscorea rotundata64.468.0684.75682forward
CNT30583684Nymphaea colorataEchinochloa crusgalli64.5932.5985.67684forward

Expression of CNT30641434

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 2 (67 aa)
MQTTTTTLPKDTGRRTTKSSGTDTRFIQEGLPLIDHRGDAEPGAGWTPSGCCSQQAYAHPPAASLQR*

>peptide 3 (52 aa)
MSLCWSGGMPSLSWIFAFTLSIVSELSTSRVMVFPVRVFTKICIPPRRRSTR*

Sequence

>CNT30641434
AGATGAGCTCCAGCCAATAACAAGGTTCACATTCGATTCAAGGTTCAAACCTCCGTCCCTGACCGCCTGAGTATCACAAGCTGTGGGGGTTCCAGTATCA
ACAGAATCAACGCGACCACAAACAAGCCACAGAGAACCGTAAATATCAAACTCGCAACCAAATCCTATTTATTCGCAAGCAATAAACGCTCGTGGATAAA
CCAAGAGCCAGACAACACATCAGGTCCTGTACAAAAAGTCCACGACCGAAAGACACGAACACAGAGAACCAAAGATGCAGACGACGACGACGACACTACC
CAAAGACACCGGACGACGGACAACAAAGTCATCAGGTACCGACACCAGATTTATTCAAGAGGGCTTGCCTCTCATTGACCACCGCGGAGACGCAGAACCA
GGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGCGTACGCCCATCCTCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGGAT
GCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATTGTATCAGAGCTCTCCACTTCCAGAGTGATGGTCTTCCCCGTAAGAGTCTTCACAAAGATC
TGCATCCCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGA
AGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTGTCAATTGTATCTGAACTCTCAACCTCAAGGGTGATGGT
CTTCCCAGTGAGGGTCTTAACAAAGATCTGCATGCCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGCCAAGGTA
CGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATTCCCTCTTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGT
CTGAGCTCTCAACCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGC