Detailed information on CNT30345069


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702712Eragrostis tefQuercus lobata37.0125.6981.86215forward
CNT30727836Eragrostis tefCorchorus capsularis38.0459.4182.35221forward
CNT30620107Eragrostis tefCajanus cajan44.2318.4980.54257forward
CNT30570222Eragrostis tefVitis vinifera46.1353.7182.46268forward
CNT3037147Eragrostis tefCucumis melo33.5626.9780.51195forward

Expression of CNT30345069

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MPRVGALVHGVQVLGSLHLRLATRQELQVF

>peptide 2 (56 aa)
LNCSEALIIEYNIPITYILICKICSNQIHISHRHLSTHVCPQNTDGRQGNKALEIM*

Sequence

>CNT30345069
ATTAAATTGCTCAGAAGCTCTGATCATAGAATATAATATTCCAATCACATACATATTAATATGCAAAATTTGCAGTAACCAAATCCACATTTCACATAGA
CATTTGTCTACTCATGTTTGTCCGCAAAATACAGACGGCAGACAAGGTAACAAGGCTCTAGAAATCATGTGAATGCAGTAACATTCCAAGTTTCCCACTT
AGTAGGGGTGGTAAAAAACGCAGTGTATTTTGTCCATCTGAACCTGTAACTGCCTACAGTGCCCTCAAGGTGCTAGCAGTGTATCATCTTAGTAGCTGTA
GTTCTTGACGAACATGTCCTCCTTGGCCGCCTCAGCCTCACCGTCGCTAGTGTACTTGCCGAGCTGAGCCAGGGAGTTGGCCTTGGCGCGCAGCAGCAGC
GCGTCCTGCGCCGCCTTCAAGTTCTCGGGCCGGCCACCCCATGTCTTGAGGCAGGTGTTCTGGAGAGCCCTGGCGTAGGAGAAGGACACATGCCACGGGT
TGGCGCCCTGGTTCATGGCGTTCAAGTTCTGGGTAGCCTCCACCTCAGACTGGCCACCAGACAGGAACTGCAGGTTTTTTT