Detailed information on CNT3037147


BLAST search results

BLAST vs Swiss-Prot:
sp|Q944G9|ALFP2_ARATH, E-value = 4e-71

BLAST vs NONCODE:
NONMEST001145, E-value = 3e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640893Cucumis meloNymphaea colorata31.2625.0382.74226forward
CNT30702712Cucumis meloQuercus lobata31.1226.8881.33225forward
CNT30727836Cucumis meloCorchorus capsularis24.6247.8583.71178forward
CNT30381342Cucumis meloManihot esculenta31.428.0981.94227forward
CNT30710712Cucumis meloGlycine max26.2834.4285.79190forward
CNT30145300Cucumis meloMedicago truncatula12.4541.2887.7890forward
CNT30345069Cucumis meloEragrostis tef26.9733.5680.51195forward
CNT30620107Cucumis meloCajanus cajan30.5715.984.62221forward

Expression of CNT3037147

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MQIQASYMGLRRPQTKLKIITKMFIKLLRIHKNSFFFFFFVLFKLL*

>peptide 2 (66 aa)
MRRTHAMGLVLGSWHSRTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR*

>peptide 3 (81 aa)
MAFKNSRRDSSLEKRKSVLSNCLRACFVFALSSRSNHAWFQKNSFKQNIVLCKVEEDLCPNFLCYLEGSVNPVLTVKQDLRL

Sequence

>CNT3037147
CATGATTAATGCAAATTCAAGCATCTTACATGGGATTGAGAAGACCACAAACTAAACTAAAAATCATCACCAAAATGTTCATTAAGCTGCTAAGAATACA
CAAAAATAGTTTTTTTTTTTTCTTTTTTGTTCTTTTTAAATTGCTATAAAGCATCATCATCATAAACACAATAAACACAGCAATTAGTCTCCAACTTCAA
CCATCATCATCTTCTTCTTCTTTTTTCATCTTCTTGATCTATAGAAAAGCTTAGTATGTGTAGCCCTTGACAAACATTCCCTCCTTTGCTTCGTCAGACT
CACCGTCACCAGTGTACTTCCCAAGCTGGGCGAGGGAGTTCGACTTGGCTCGTTGAATCAGAGCATCCTGTGCGGCCTTCACATTCTCTGGTCGTCCACC
CCATGTCTTCAAGCAAGTGTTTTGGAGAGCTCTAGCATATGAGAAGGACACATGCCATGGGTTTGGTGCTTGGTTCATGGCATTCAAGAACAGCAGGAGG
GATTCTTCTTTGGAGAAGAGAAAGAGTGTACTTAGCAACTGTCTCAGGGCTTGCTTTGTCTTTGCTCTCAGCTCCAGGAGTAACCATGCTTGGTTTCAAA
AGAATTCCTTCAAACAAAACATTGTTCTCTGCAAGGTAGAAGAAGACCTCTGCCCAAACTTTCTGTGCTACCTCGAAGGTTCTGTCAATCCCGTGCTCAC
CGTCAAGCAAGATCTCCGGCTCG