Detailed information on CNT30329871


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372056Dioscorea rotundataArabidopsis thaliana21.6213.039080forward
CNT30711358Dioscorea rotundataGlycine max3013.3481.98111forward
CNT30173586Dioscorea rotundataTrifolium pratense29.7311.5184.55110forward
CNT30311401Dioscorea rotundataCamelina sativa21.6210.148580forward
CNT3077317Dioscorea rotundataBrassica juncea21.6238.658580forward
CNT30611481Dioscorea rotundataArabis alpina26.4912.0282.6598forward

Expression of CNT30329871

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MDIRRSTGRSFNKKRGFSRGGKGSRRRGMERSSSKQLPSCLH*

Sequence

>CNT30329871
CTGCCATTGATTACCTCGCCATAAGCTAACCATCTTGGCTCAATGAATCCTCCAGTGCCTTCTGGGTCTGATAAACCAAGAGGATCAAACCCATAATCAC
CAGGAAGACTGCAAGATTCATCATCATCATCATCATCATCATCATCATCATTATATATATATATATATACATATATGGATATAAGGAGGAGTACTGGAAG
AAGCTTTAACAAGAAAAGAGGATTTTCTAGAGGAGGAAAAGGATCTAGAAGGAGAGGAATGGAGAGGTCTTCCTCCAAGCAATTGCCTTCCTGCCTCCAT
TGATGAAAGAAGAGCTTGAGTAGCCATGGACTCTTTCTTGTTTGTTTGATGAAGGAGTGAATGAGAGAAA