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Detailed information on CNT30711358


BLAST search results

BLAST vs Swiss-Prot:
sp|P12332|CB21_SILLB, E-value = 2e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30329871Glycine maxDioscorea rotundata13.343081.98111forward

Expression of CNT30711358

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KEQREDIERWLSFGNCEANKNQDQEGKEYDIIHLVELETGQDVVVHGVSQMI*

Sequence

>CNT30711358
AAAGAGCAAAGAGAGGATATAGAAAGGTGGTTGAGCTTTGGTAACTGCGAAGCGAACAAGAACCAAGACCAAGAGGGTAAAGAATATGATATAATACATT
TAGTGGAACTTGAGACTGGTCAAGATGTTGTTGTGCACGGGGTCAGCCAAATGATCTAGGAGGTTTTGGTATGGGCCAACACCTGTGACAAGAGCTTGAA
CAAAGTAACCCAAGATTGCCAACATAGCCAACCTTCCATTCTTCACTTCCTTGAGCTTCAAATCCTTCAAGGACTTCTCATCCTTACCAAAGCCAAGAAG
TATTGTTTGCCCATAGAGCCTGTGCTGTCTCCTGAGGGATCAGACCAGCCTTGCCTAGAATTTCAGGTGCTATTGCACCAACTGCACCCAACATTGCATA
ACGACCATTGATTATCTCACCATATGCTAGCCATTTCGGCTCAATGAACCCTCCTGTTCCTTCAGGGTCCGAAAGTCCCAGAGGGTCAAATCCATAGTCA
CCCGGAAGGCTGCAATGCACATGATGCCAGATAAAGTCAATTTCAGCACCAGCATAGTAACTAATTATTTACTTCTCTTCTAAATTGCATAGATACACTA
GTGTTATTCGAACAAGGTTCCCAGGAACGGAATAAAATGAATTAAGTTTCTTTCATAAGTTTATTGGAGAAATTAAGCGAAAGAGCTACTATAAATTAAC
TTAATTATGTTTTAACTCATGAAATAAACTTCATTTTACCTTTTTATTCTTCAAGTGCTCATGAGAAGTTTATATATCCAGACATGATCATATCGTTATG
TTAAGCTATTGATGAACTAGGATGAAATTTAC