Detailed information on CNT3077317


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SY97|LHCA3_ARATH, E-value = 3e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30329871Brassica junceaDioscorea rotundata38.6521.628580forward

Expression of CNT3077317

Peptides detected in this lncRNA

>peptide 1 (40 aa)
PKKYCLPIDPGLYQSCNLRISGAIAPAAPNIANRPLMISP*

Sequence

>CNT3077317
GCCCAAGAAGTACTGTTTGCCCATTGATCCTGGGTTGTACCAGTCCTGCAACCTCCGAATCTCAGGGGCAATAGCTCCAGCTGCACCCAACATAGCGAAC
CGTCCGTTGATGATCTCTCCGTAGGCTAACCATCTCGGTTCGATGAATCCTCCAGTACCCTCTGGGTCTGAAAGACCAAGAGGGTCGAATCCATAGTCGC
CAGGTAA