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Detailed information on CNT30315306


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 4e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515406Corylus avellanaJuglans regia30.6936.6186.02186forward
CNT30380725Corylus avellanaManihot esculenta22.4423.0583.09136forward
CNT3010182Corylus avellanaZea mays20.6315.9280.8125forward
CNT30651308Corylus avellanaRosa chinensis25.0826.3980.26152forward
CNT30619829Corylus avellanaCajanus cajan25.7415.8282.69156forward
CNT30174623Corylus avellanaVigna angularis22.1115.7382.84134forward

Expression of CNT30315306

Peptides detected in this lncRNA

>peptide 1 (88 aa)
AGGHLENLFLGTLPCDRVKFFNLGLTEQTPGAAAENRGGGAWVQLRWGEAHWSPCGSLDFFIHGSSYLNCALCHGEFEWLRSSEGQGR*

Sequence

>CNT30315306
CCGCCGGTGGGCATCTCGAAAATTTGTTCCTTGGGACTCTCCCATGTGATCGCGTAAAATTCTTCAACCTGGGCCTTACGGAGCAAACCCCCGGTGCTGC
CGCCGAAAATCGGGGAGGGGGTGCTTGGGTCCAACTCAGGTGGGGTGAAGCCCACTGGAGCCCCTGTGGGAGCCTCGATTTTTTCATCCACGGAAGCAGC
TACCTTAACTGTGCGCTGTGCCACGGAGAATTTGAGTGGCTTAGGAGTAGTGAAGGACAAGGTCGATGATTGCTTCCATGGCACGGTGACGCGGTCGCCG
GACTTTGAGGTGGAGAGTGGTGGGGTGAAGCCCACTGGAGCCCCTGTGGGAGCCTCGATTTTTTCGTCCACGGAAGCAGCTACCTTAACTGTGCGCTGTG
CCACGGAGAATTTGAGTGGCTTAGGAGTAGTGAAGGACAAGGTCGATGATTGCTTCCATGGCACGGTGACACGGTCGCCGGACTTTGAGGTGGAGAGTGG
TGGGGTGAAGAGGGAGGCTTGGGTTGCCATGGCCATGAAGGATTTGAGATAAGGTGATGAATCTGATGATGGTTGATGGTCTTAAGGCTGTGAGGGATGA
ATAAAG