Detailed information on CNT30515406


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315306Juglans regiaCorylus avellana36.6130.6986.02186forward
CNT30371945Juglans regiaArabidopsis thaliana39.5746.7482.09201forward
CNT30403648Juglans regiaBeta vulgaris45.0820.6583.41229forward
CNT30171560Juglans regiaTrifolium pratense45.0828.4182.53229forward
CNT30477818Juglans regiaArabidopsis halleri36.4239.5381.08185forward
CNT30361778Juglans regiaSorghum bicolor24.6117.0881.6125forward
CNT30579357Juglans regiaEchinochloa crusgalli24.6115.0681.6125forward

Expression of CNT30515406

Peptides detected in this lncRNA

>peptide 1 (83 aa)
VLWVQILDLSIWEHPVKLVLDLVLRPQPSPQSQALLLPGQFEQVRTLPHNGCTSGGHLKDLFFGRVPSDHIKLFNLSLPQQLP*

Sequence

>CNT30515406
CGTCCTTTGGGTGCAAATATTGGACCTCTCCATTTGGGAACACCCTGTAAAACTGGTACTTGATCTTGTACTTAGACCTCAGCCTAGTCCCCAGAGCCAA
GCACTGCTCCTTCCTGGCCAGTTTGAGCAGGTTAGGACCCTGCCTCATAATGGCTGCACCTCCGGTGGGCATCTCAAAGATTTGTTCTTTGGGAGAGTCC
CAAGTGATCACATAAAACTCTTCAACTTGAGCCTTCCGCAGCAGCTGCCTTGATTGTGCGCTGGGAGACAGAGAATTTAAGTTGCTTGGGACTGGTGAAG
GAGAGGGTTGAGGATTGTTTCCATGGCACGGTGACACGGTCCCCGGACTTTGAGGCCGAGAGGGGAGGGGTGAAGAGGGAGGCTTGGGTTGCCATGGCCA
TGAAGGGCTAGAGATAAGGGGATGATGGTTGGTGCAAGCTGCTTGATAACGGGGATGATGGTTGTGTGGGATCAATAAGGTTGGGGATGTTAGTATGGGG
GGAGTTTG