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Detailed information on CNT30304182


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702494Triticum aestivumQuercus lobata38.2437.9985.43405reverse complement
CNT30201970Triticum aestivumPisum sativum41.7428.6883.71442reverse complement
CNT30231904Triticum aestivumAnanas comosus25.431.9589.22269reverse complement
CNT30573632Triticum aestivumVitis vinifera20.4917.9583.41217reverse complement
CNT30104319Triticum aestivumOryza rufipogon71.167.9696.02753forward
CNT30333539Triticum aestivumCynara cardunculus9.2526.7891.8498reverse complement
CNT30723871Triticum aestivumLupinus angustifolius41.459.2584.97439forward

Expression of CNT30304182

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MTASKISIYTGTLIPDCVSEKVAYLTERAGTLGAEVGTLVFQPHRHFEFSGALFTYSLYELQVNGAGAW*

>peptide 2 (67 aa)
MRKVLVLSHGVNNANPSFCAGKKIRKGEAFSWFPNLLLLKAALSRLDFGPAYCEDPVSRTSSFSLLGS

Sequence

>CNT30304182
CATCTGCTCCCCCTAAACTATAACGGGTCCCATCTCTCTCCAAACCTAACGTGGTAGTTTCCCATCATAAGGCTTTCCATCTATAGATTGAGCCATTACC
CACCAAGGATCCCATTCGTTCAGAACTCAGTCGACTGCTTCTATAGATAAGGCGGAACGTCCTTAGTTCAGCATTATAGCACATAGTCTCCGACGCTACT
ACAGCGCTTCGCTAACTCGAAGCGCCTCGCTATGAGAATGACGCGTCGCTAACGCTCGGCTAAGTCGTCGAACCCTCGCGCTGACCATTCGCTTTCTCAG
TAGCGAAAGCGCTTCTCTTTGCCCCTTAACTTCATAAAGTATTTGGAAAGAAAAGAAAGAGATTCTTGGTTTTATTGCTCCCGCTTCCTCATCTGCGCTC
GTCAAGCCAAATTTGCTTTTTGGGAGGCGAAAGAGGGGTTGAAGCGGACATGTCGAAATGACAGCATCGAAGATATCTATATACACAGGAACGCTTATTC
CAGACTGCGTTTCGGAAAAAGTAGCCTACTTGACAGAAAGGGCGGGCACTCTCGGCGCGGAGGTAGGCACTCTCGTCTTTCAACCCCACCGTCACTTTGA
ATTTAGTGGGGCACTGTTTACTTACAGCCTCTACGAGTTGCAAGTGAATGGGGCCGGTGCGTGGTGAACGGAAGGGTTCATCAAGCCATTTCTCGCCTTA
ACCCCTAAACTAAATAGGAAGAGGGGTACTTGACTAATAGGGGGCAATTGCATTGCACCTGACTGTGAGGGACCTCTTGATACCTTATGTTCACTTCCTA
ACTAGTAGCCGGTTTCCTGTCGCGGAAGCCTTTTCCCAGTGCGCGGAGCCCCGATGAGGAAGGTGTTAGTGCTTTCTCATGGGGTCAATAATGCTAATCC
CTCTTTTTGTGCCGGGAAGAAGATAAGAAAAGGCGAAGCCTTCTCTTGGTTTCCCAACCTGTTGCTTCTAAAGGCTGCCCTCTCTCGGCTGGATTTTGGT
CCAGCCTACTGCGAGGATCCCGTATCCCGTACATCGTCTTTCTCCCTCCTGGGTTCCCG