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Detailed information on CNT30573632


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304182Vitis viniferaTriticum aestivum17.9520.4983.41217reverse complement

Expression of CNT30573632

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVLLPVHAHSRAHQCLHDAQLQDLRNCATDYQRQKFKP*

>peptide 2 (32 aa)
MSLQISSLRFPLFVCGSWEFCPNFDLFSISSL*

>peptide 3 (47 aa)
MPKITFADYEKKNIINKKSQVGILPYVSSDFKPPFSSLRLRLLGILP*

>peptide 4 (83 aa)
MAGNGLDGSAASSRPLSGTSMFTRCSAARFKKLCNRLPEAKIQAIRDLQFGGLLNLNCTEVRHNLCIFLIQHFNVGFRRIEFSA

Sequence

>CNT30573632
GGGAGAATTGTGTTTTGGGCCCAGCTGGGCCCAAAAATTAAGGAATGGTCCATCTAACCGACCCATTTAAGCTGAAAACCCATAGGAAGTGTCAAAATTA
AAAAGAAGGATATGCACTTTTATTAATGCCAAAAATAACCTTTGCTGATTATGAAAAAAAAAATATAATAAACAAAAAAAGCCAGGTTGGAATTTTGCCC
TATGTCTCTTCAGATTTCAAGCCTCCGTTTTCCTCTCTTCGTCTGCGGCTCTTGGGAATTTTGCCCTAATTTTGATCTCTTCAGCATTTCAAGCCTATAA
GCCATTTTCTTCGCTGCCTAGAAGCCGTTTTCTTCTCTGTGTAGAAGCCGATTTCTTCTTTGCCTAGAAGCCGTTTTCTTCTCTACCTAGAAGTCGTTTT
CTTCTCTGCTTAGAAGCCGTTTTTCCTTCTCGTTCCGGCCACCCTTTCTCTAATAATAAGGGCGTTAAGAAACCTATACAAGGGGCAAGCCAAAACCTTT
TACTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAACAGGTTGGTCGTAGATC
AAGAACGATTCGCGTTTTCTTATCTTCTTCCCGCCCTAGGAGTAGGAGTAGCACAAAAAGAGGGATTACCATTATTGACCCAATGATAAACCACTAACAC
CTTCCTCGTTGGGGCTCCGCGCACTGGGAAAACGCTCTACCGAGTTTCTCCATCGCTTGCATCTCAATCTCTGCGGCTCTTTCATTTTTTCTCGCATTCG
GCTCTCTGGAAAATTTGAATCAGCATTTCAAGCCTAGAAGCCGTTTTCTTCTCTTCCTCCCGAGCACCTCCATCGGTTGCATCTCAATCTTTGCGGCTCT
TTCATTTTTTCTCTCATCCGTCTCTCTCGAGAATTTGAATAAGTTATAATATTAACAATGGCTGGTAATGGCTTAGATGGTTCTGCTGCCAGTTCACGCC
CACTCTCGGGCACATCAATGTTTACACGATGCTCAGCTGCAAGATTTAAGAAACTGTGCAACCGATTACCAGAGGCAAAAATTCAAGCCATAAGAGACCT
CCAATTTGGAGGTCTCTTAAACTTAAACTGCACAGAGGTGCGCCACAACCTCTGTATCTTTCTAATCCAACATTTCAATGTTGGATTTAGACGGATAGAG
TTCTCAGCC