Detailed information on CNT30269395


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690369Chenopodium quinoaOryza sativa5.4736.481.76170forward
CNT30536152Chenopodium quinoaEucalyptus grandis5.9938.9181.18186reverse complement
CNT30727836Chenopodium quinoaCorchorus capsularis2.924.1983.3390forward
CNT30381205Chenopodium quinoaManihot esculenta3.0323.5685.1194forward
CNT30542943Chenopodium quinoaBrassica napus5.2835.3481.71164forward

Expression of CNT30269395

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIDLVHVPCMYIIIHFYSHLPSPQFFSTTVTSVSNKTYADLQN*

>peptide 2 (46 aa)
MIQAPLWSLCLVPGPLVYWGSHFSCMPGFHHLHRHTDTHIKEASND*

>peptide 3 (56 aa)
MLIYRIKMKESLKAAYHDSRNSRRHSPPKHLKCMLCNGFWRILFFVLSSWGNHAWL*

>peptide 4 (84 aa)
MEPEIYSPSPGVVRRSCLYAWRLASVLSKPIDANLFPQVALDSSMARIPRPGEAIVFCRIITKILYTDKNDETIRSKLKKSLKA*

>peptide 5 (30 aa)
MDSGESFSLCSAPGVTMLGFRRIPSKTTLF*

>peptide 6 (33 aa)
MDLLFPTLRLYPFLDCYKKLETIVSFLLPIYKV*

>peptide 7 (34 aa)
MINFLVLIIIDFLTLTRGCLAKLSLPLLNFTPFT*

>peptide 8 (36 aa)
MEYLQLYAYVCKNQAGKLSRYLQKMGKTKFSFLASE*

>peptide 9 (29 aa)
MINKNTSSPSLLTSNKSLILSPVLEIKQD*

Sequence

>CNT30269395
ATATGAGAAAGAGACGTGCCATGGGTTGGGGCTTTGGTTCATTGCGTTAAGGTTTAAGGTTGCTTCCACTTCTGATTGACCTCCAGACAAGAACTAATAC
AAACGGAAAAAATGATATTAGACCTCTTTGTACGTCAAGTTGACAAAAATAATCACAATCAAGGAATCAATAGACAATAATGATCAATTTTTTAGTCCTT
ATAATAATCGATTTTCTAACCCTTACAAGAGGGTGCCTTGCCAAACTTTCACTGCCCCTACTTAATTTTACCCCTTTTACCTGAAACCTAACTAGATCAG
CTGGAGATTGAGGGAGAAAGAAAGGGTAAAAAGGAACATGGACCAATACGCTAAGCCACGTTCAGATAAATACCATGAACAAATTAATTAATGGGAAAGC
AAAGGGTAAGTCAAGGCAGAGCTCATAAAGCAGCAACACCAAGCTAATTTAGAAAATAAGTCAACCCTCAGCCACAATATCAAAAAGTCATAGGATTAGA
CACAGATAGTTCATTTGAAAAGTCCCAAAGCTAGAATTGAGTGCACGAAATGAGGAAAACTACATAATTGGGATCTAGGATTTTCCATGGATCTTCTCTT
CCCCACCCTCAGATTATATCCTTTTCTTGATTGCTATAAAAAATTAGAGACTATAGTCTCCTTTCTTCTTCCAATATACAAAGTATGATACAGGCACCTC
TCTGGTCCCTTTGTCTGGTCCCTGGTCCCTTAGTTTACTGGGGGAGTCATTTCAGTTGTATGCCTGGGTTTCATCATTTGCATAGGCACACCGATACTCA
TATTAAAGAAGCGTCAAATGATTGATTTAGTTCATGTTCCTTGTATGTATATAATTATTCATTTTTATTCCCACCTTCCCAGTCCTCAATTTTTCTCCAC
AACGGTCACGTCTGTTAGCAACAAAACCTATGCTGATTTACAGAATTAAAATGAAAGAAAGTTTAAAAGCAGCATACCATGATTCCAGGAACAGCAGGAG
GCACTCTCCTCCTAAGCATTTGAAGTGTATGCTTTGCAATGGATTCTGGAGAATCCTTTTCTTTGTGCTCAGCTCCTGGGGTAACCATGCTTGGCTTTAG
AAGGATTCCTTCAAAAACAACATTGTTCTGAGCCAAGTAATAAAAGACTTCAGCCCACACCCGCTCAGCAACTTCCAGAGTCCTCTCGATTGGGTGGTCA
CCATCAAGAAGGATTTCTGGTTCCACAATGGGAACAAGGCCATTGTCCTGAAGCATAAACAAGCAATTACAAAAACAATAAATTTGAAGGACTAATCAGA
TGTAGGAATCAACTTATGAAGCAATACATTGAAGTCAAGAACCCGTCCAAAAAAACTACCATCTATGCAAGAACCTACTCTTACATAGGTTTATACAACT
AGATTAGCTCATTCAACTTGCATAAAGAAGGTGAGAAATTTTCTTCATAAAAAAGAACATTATAGGAGCTCCAATTCTGCCTTACCAGCAGCATTTTATT
TATATTTATTAAAAAAATAAGAAAATGAAAAAAAGCCAGGACTATCTGTCTGGACCCTTTAAGCTTCACCAAAGAATAATAATTTGAAATTTAGTACAAG
CAATAACGCAGACAATCAGATCTCAGAACTTCAAACGCTTCATGTTTTTCAAAAAGATGTTAGCACAGAATCACTCTTCAGCATCGGGTCTCAACTAGGA
GTATTGGCAAGTTTGGGTGGGTTATAGCGATAACCCAAACACAACCAGGTTGGGCTTCATTTGATCACCCTAGATTTTTCATCATACAGTATTTGAGGTC
CTGCTGATGCCAACAGGAGGTGGCCTTGCTATGTGAAATAAAAGGCCATTAAGACCTCTCAGTTAATAAATCTTTTGCTACACTATGTTAAAATTGAATT
TAGTGAAAAAGATGTCTACAATATACAGTTATCAAAGCTCAGACATCCAAACTACCAAATGATCAACAAAAATACTTCATCGCCTAGCCTGTTAACTTCC
AATAAGAGCTTAATTTTATCTCCCGTGCTGGAGATTAAACAGGACTAGACTTGAAAGGCACCAGAGCACCACACAAAAATTATAGCATGGTACACACTTA
TATCACATATGATTCACAAAATTAATTACAGACCACTGTAAATCTAAGTGCTTTGAGTTGGTTAAAGCCAAACATTGAAGTCTGTCTAAAATAAGCTAAA
AACATTTCAAAGAAAAGCATCAAGTTTTTTGTGTACCTGAGAAACAGCAGCATAACGAGCAAGTCCCCAAGCAGCTTCCTTAACAGCTAAAGCAGAAGGT
CCACATGGAATACTTACAACTGTACGCCTATGTTTGTAAAAACCAAGCAGGCAAATTATCAAGATATTTGCAGAAGATGGGAAAAACAAAATTTAGCTTC
TTAGCATCTGAATAAGGGATCGATACCAAAAGTATCTTTGCTAAACATTTCAAAAACCCCAACCCCTAGCCCCAAAGAAATCGATATAAGAGAATAATTC
TGAGTTGAGCACAGGTTAAATTTGGCTCACCATTTTGCAAAGCGAGCACCCTGTTGATAGTACTTGGCAGATCTTGAAGCCAAACCGTCTAACCCTTGGC
ACCAAGATTCATTATTTGACCCTGGCAATGGAGACAAACCCTGAAAGGTAGACGAAAGAAACAGAAATGTGAGGAAAATACAAAGCCATCAATGTGCATT
AGTTATACAATACAAGACATAGGATGGAACCAGAAATATATTCACCTAGCCCAGGAGTCGTAAGGAGAAGCTGCCTGTACGCCTGGCGATTAGCTTCTGT
GTTATCTAAGCCAATAGACGCCAACCTTTTTCCACAAGTTGCATTAGATTCATCAATGGCAAGGATACCACGTCCAGGAGAGGCAATAGTTTTCTGCAGA
ATAATAACAAAAATTTTATATACAGATAAAAATGACGAGACTATTAGAAGTAAATTAAAGAAAAGTCTGAAGGCATGAATCAAACCACAAATGAAATAAA
AAAAAATGTCTTCAGAAGACTAGAAAGATAACAGGGAACTCGGATGGAAGCATCTTTTGTGTTTAACACTTTGGTAAACAAGATGTCACTGCTACATTTT
GGTCTG