Detailed information on CNT30690369


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZU52|ALFP3_ARATH, E-value = 3e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269395Oryza sativaChenopodium quinoa36.45.4781.76170forward

Expression of CNT30690369

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MLISFRMWHSTHQLPGYHALGKQQISAQMENELVGVGDGGGADHRSTAGRRGSA

>peptide 2 (46 aa)
MDANLFPHVAFDSSIARIPRPGEATDFCTDGKRARRRRRRRRRGSP*

Sequence

>CNT30690369
CCACTTAGCGAAGCGTGCCCCCTGCTTGTAGTACTCAGCACACCTTGAAGCCAAACCATCTAGGCCTTGGCACCAAGATTCATTGTTGGACCCAGGCAAT
GGAACCAAGCCCTTGTCGACCTTGATACCGGGCATGATATTCTGATCCTTCAAGCAGTCAACAAACTTCTTACCATCAGTGGTTGACTGATAAAGAGTTT
CCTCAAAAAGGATAGCACCAGAAATATATTCACCAAGACCAGCAGTGGTCAGTAAAAGCTGCCTGTAAGCCTGGCGGTTAACTTCTGTGTTGTCCAAACC
AATGGATGCTAATCTCTTTCCGCATGTGGCATTCGACTCATCAATTGCCAGGATACCACGCCCTGGGGAAGCAACAGATTTCTGCACAGATGGAAAACGA
GCTCGTCGGCGTAGGAGACGGCGGCGGCGCGGATCACCGTAGCACGGCGGGGCGGCGCGGATCGGCG