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Detailed information on CNT30381205


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJU4|ALFP1_ARATH, E-value = 1e-20

BLAST vs NONCODE:
NONMEST001145, E-value = 4e-136

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524374Manihot esculentaSetaria italica28.8211.6485.22115forward
CNT30269395Manihot esculentaChenopodium quinoa23.563.0385.1194forward
CNT30570192Manihot esculentaVitis vinifera54.6450.2381.65218forward
CNT30582099Manihot esculentaEchinochloa crusgalli22.8116.8887.9191forward
CNT30725421Manihot esculentaLupinus angustifolius26.8214.6285.98107forward

Expression of CNT30381205

Peptides detected in this lncRNA

>peptide 1 (47 aa)
QNEAFQYMVHHIKYTLTNLISKWLIKWWLKVHVITKNKNSLQGYKAF*

>peptide 2 (29 aa)
MRRTHAMGLDLGSWRSGSRLLQPQIVHQTR

Sequence

>CNT30381205
ACAAAATGAAGCATTTCAGTATATGGTGCATCATATCAAGTACACACTAACTAATCTCATCAGCAAATGGCTTATTAAGTGGTGGCTAAAAGTACATGTT
ATAACAAAGAACAAAAATAGTCTGCAAGGCTATAAAGCATTTTAACACACAGTGAGAAATTAATCTTGCATTTGATTTCTCCTTCAACCTTCATTCTGTA
GCTTAGTACACGTAGCCCTTGACGAACATTCCTTTCTTGGCTTCCTCTGATTCTCCTTCGCCGGTGTACTTGCCAAGCTGAGCAAGTGTTCTGGAGAGCT
CTTGCATATGAGAAGGACACATGCCATGGGTTTGGACCTTGGTTCATGGCGTTCAGGTTCAAGGTTGCTTCAACCTCAGATTGTCCACCAGACAAGAAC