Detailed information on CNT30237764


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372997Brassica oleraceaArabidopsis thaliana10041.7990.43303forward
CNT30538923Brassica oleraceaBrassica napus10010098.35303forward
CNT30313675Brassica oleraceaCamelina sativa95.3897.6487.2289reverse complement
CNT3059454Brassica oleraceaArabidopsis lyrata10010089.44303forward
CNT30263706Brassica oleraceaBrassica rapa10010097.69303forward
CNT30477933Brassica oleraceaArabidopsis halleri10010089.44303forward

Expression of CNT30237764

Peptides detected in this lncRNA

>peptide 1 (45 aa)
SSSVTRACDPCGDNKLAEHWLGPQVGSVVALFWAAQSKPRVNRVC*

>peptide 2 (40 aa)
MRQAGFTEQRSPPSFGSGRITAQRHSGSPWPAGSYPAGQPF

Sequence

>CNT30237764
GTCGAGTTCAGTAACAAGGGCTTGTGACCCATGTGGGGACAACAAGTTGGCTGAACACTGGCTCGGTCCACAGGTCGGATCTGTTGTGGCACTGTTCTGG
GCTGCCCAGTCCAAGCCGAGAGTGAACCGTGTGTGTTGAGCGAAGGCTTGGCTCAGGCGGTTCCTAAAGTGGAGGGCAATGCGCCAGGCTGGTTTCACAG
AGCAGCGATCACCTCCCTCTTTCGGCAGTGGACGGATCACGGCTCAACGTCACTCAGGTTCACCATGGCCTGCTGGCTCGTACCCAGCTGGACAACCATT
TTT