Detailed information on CNT30538923


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237764Brassica napusBrassica oleracea10010098.35303forward
CNT30313675Brassica napusCamelina sativa95.3897.6487.2289reverse complement
CNT30477933Brassica napusArabidopsis halleri10010089.44303forward

Expression of CNT30538923

Peptides detected in this lncRNA

>peptide 1 (45 aa)
SSSVTRACDPCGDNKLVEHWLGPQVGSVVALFWAAQSKPRVNRVC*

Sequence

>CNT30538923
GTCGAGCTCAGTAACAAGGGCTTGTGACCCATGTGGGGACAACAAGTTGGTTGAACACTGGCTCGGTCCACAGGTCGGATCTGTTGTGGCACTGTTCTGG
GCTGCCCAGTCCAAGCCGAGAGTGAACCGTGTGTGTTGAGCGAAGGCTTGGCTCAGGCGGTTCCTAAAGTGGAGGGCAATGCGCTAGGCTGGTTTCACAG
AGCAGCGATCACCTCCCTCTTTCGGTAGTGGACGGATCACGGCTTAACGTCACTCAGGTTCACCATGGCCTGCTGGCTCGTACCCAGCTGGACAACCATT
TTT