Detailed information on CNT30225566


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB23|METK2_HORVU, E-value = 6e-64

BLAST vs NONCODE:
NONPOPT000587, E-value = 5e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618114Hordeum vulgareSesamum indicum62.8747.5781.4215forward
CNT3047442Hordeum vulgarePrunus dulcis68.1338.4581.97233forward
CNT30441436Hordeum vulgareAegilops tauschii74.2750.197.64254forward
CNT3014998Hordeum vulgareZea mays79.8249.2884.98273forward
CNT30477100Hordeum vulgareArabidopsis halleri43.8637.9785.33150forward
CNT30331991Hordeum vulgareDioscorea rotundata37.4327.0686.72128forward

Expression of CNT30225566

Peptides detected in this lncRNA

>peptide 1 (35 aa)
VKVLLHELEDLPVGDLAGAVGVDEHRQRLRYTDGI*

Sequence

>CNT30225566
GTCAAAGTTCTCCTTCACGAGCTTGAGGATCTCCCTGTCGGGGATCTTGCCGGTGCCGTAGGAGTCGACGAACACAGACAAAGGCTCAGGTACACCGATG
GCATATGAGATCTGCACAATGCACCGGCGTGCGAGGCCGCTGGCGATGATGCTCTTGGCAGCCTGCCTGGCAATGTAGGCGCCACTGCGGTCGACCTTGG
TAGGGTCCTTGCCAGAGAAGGCACCGCCGCCGTGGGCTCCCCAGCCACCATAGGTGTCGATGATGATCTTGCGGCCGGTGAGGCCGGCATCGCCATGAGG
GCCGCCGATGACGAAGCGGCCAGACGGGTTCAGGTGGAAGAT