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Detailed information on CNT3014998


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 2e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Zea maysSetaria viridis70.5850.4591.3391forward
CNT30521359Zea maysSetaria italica48.9241.1290.41271forward
CNT30549537Zea maysIpomoea triloba29.624.6284.15164forward
CNT30698521Zea maysQuercus lobata29.629.2384.76164forward
CNT30372626Zea maysArabidopsis thaliana20.417.6383.19113forward
CNT30266729Zea maysChenopodium quinoa48.9221.0282.66271forward
CNT30729630Zea maysCorchorus capsularis25.8117.4683.22143forward
CNT30712535Zea maysGlycine max15.1620.2489.2984forward
CNT30189384Zea maysSecale cereale48.3834.186.19268forward
CNT30301451Zea maysTriticum aestivum48.9275.786.72271forward
CNT30225566Zea maysHordeum vulgare49.2879.8284.98273forward
CNT30508545Zea maysSolanum lycopersicum32.4943.4881.11180forward
CNT30441436Zea maysAegilops tauschii42.0645.9684.55233forward
CNT30667060Zea maysTriticum dicoccoides48.7442.5285.19270forward
CNT3059692Zea maysArabidopsis lyrata13.926.6489.6177forward
CNT30471290Zea maysSaccharum spontaneum48.9230.1893.36271forward
CNT30608385Zea maysGossypium raimondii25.812685.31143forward
CNT30650282Zea maysRosa chinensis44.7721.0581.05248forward
CNT30686069Zea maysTriticum urartu47.1130.6785.82261forward
CNT30477100Zea maysArabidopsis halleri20.428.6185.84113forward
CNT30368062Zea maysSorghum bicolor48.9224.6691.51271forward
CNT30597069Zea maysOryza meridionalis48.9213.5486.72271forward
CNT30432398Zea maysPapaver somniferum29.2413.3481.48162forward
CNT30331991Zea maysDioscorea rotundata27.9832.7783.23155forward
CNT30101941Zea maysOryza rufipogon48.9232.4687.45271forward
CNT30496713Zea maysDigitaria exilis48.9217.9990.77271forward
CNT30116702Zea maysOryza nivara56.8630.6789.21315forward
CNT30594307Zea maysEragrostis curvula15.1623.9391.6784forward

Expression of CNT3014998

Peptides detected in this lncRNA

>peptide 1 (37 aa)
KTRNSPHKHHLLGQYNTNDKRGADQERTTTCRSHIKA*

Sequence

>CNT3014998
CAAAACCAGAAACAGTCCTCATAAGCACCACTTATTAGGGCAGTACAACACAAACGATAAGCGCGGTGCAGATCAAGAAAGAACCACAACATGTAGAAGC
CATATAAAAGCATGATTAAGCACAGCAGACCACCAAAAGCTTCTTACTGAAAAAAAGGCCGCCTTAGGCAGAAGGTTTCTCCGACTTGAGTGGCTTCACC
ACCTCCCAGGTGAAGTCAGGGTCGTCCCTTCCAAAGTGGCCGTAGGCCGCCGTCTTGAGGTAGCGCCCGTTGCCGCCTTTCTTGAGGATCTCCTTGTCGG
GGATCGCGCCGGTGCCGTACGTGTCGACGAACACGGAGAGAGGCTCGGGCACGCCGATGGCGTAAGACACCTGGACGATGGCGCGGCGAGCAAGGCCGCT
GGCGACGATGCTCTTGGCAGCCTGCCTTGCGACATAGGCTCCGCTGCGGTCAACCTTGGTTGGGTCCTTGCCGGAGAAAGCGCCACCACCATGGGCTCCC
CAGCCACCGTAGGTGTCAATGATGATCTTGCGGCCAGTGAGGCCAGCATCGCCG