Detailed information on CNT30223362


BLAST search results

BLAST vs Swiss-Prot:
sp|P68540|COX1_AEGCO, E-value = 2e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30402960Hordeum vulgareBeta vulgaris60.8623.0592.57269forward
CNT30555227Hordeum vulgareOryza glaberrima62.4424.2598.19276forward
CNT30437404Hordeum vulgareAegilops tauschii98.1968.6799.77434forward
CNT30605231Hordeum vulgareGossypium raimondii97.0611.4794.41429forward
CNT30371457Hordeum vulgareOryza glumipatula10019.3698.42442forward
CNT30485496Hordeum vulgareChara braunii42.7614.184.66189forward

Expression of CNT30223362

Peptides detected in this lncRNA

>peptide 1 (63 aa)
RAMSSPEFARTIPVSPPMVNKNMNPTANNMGVLYCIEPPHMVAIQLKILIPVGTAMIMVAAVK*

Sequence

>CNT30223362
TAGAGCAATGTCTAGCCCAGAGTTTGCTAGAACTATTCCAGTGAGCCCTCCTATGGTGAACAAAAACATGAACCCTACAGCAAATAACATGGGTGTTTTG
TATTGTATCGAACCTCCCCACATGGTAGCGATCCAACTAAAGATTTTGATTCCTGTGGGCACAGCTATGATCATGGTAGCTGCGGTGAAGTAGGCACGCG
TATCAACGTCTAAGCCCACAGTAAACATATGATGAGCCCAAACTAGAAATCCAAGAACACCTATACTTATCATGGCATAAACCATGCCTAGATACCCGAA
GACCGGTTTTCTTGAAAAGGTCGATACGATATGACTAATAATACCAAATCCAGGCAGAATGAGAATATACACCTCTGGATGACCGAAGAACCAAAAGAGA
TGCTGGTATAATATTGGGTCTCCCCCTCCTGCAGCATCAAAA