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Detailed information on CNT30605231


BLAST search results

BLAST vs Swiss-Prot:
sp|P12786|COX1_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549614Gossypium raimondiiIpomoea triloba18.8576.3897.59705forward
CNT30402950Gossypium raimondiiBeta vulgaris19.6362.9592.92734forward
CNT3092766Gossypium raimondiiSolanum tuberosum8.1697.4490.16305forward
CNT30187765Gossypium raimondiiSecale cereale12.1157.6392.94453forward
CNT30223362Gossypium raimondiiHordeum vulgare11.4797.0694.41429forward
CNT30555227Gossypium raimondiiOryza glaberrima19.6364.594.14734forward
CNT30437404Gossypium raimondiiAegilops tauschii16.910094.78632forward
CNT30205015Gossypium raimondiiHelianthus annuus10.9610097.56410forward
CNT30682609Gossypium raimondiiTriticum urartu41.4459.9494.521550forward
CNT30371457Gossypium raimondiiOryza glumipatula34.7656.9494.541300forward
CNT30481056Gossypium raimondiiChara braunii7.8363.9783.62293forward
CNT30707976Gossypium raimondiiPrunus avium2.0633.9285.7177reverse complement
CNT30724803Gossypium raimondiiLupinus angustifolius5.1633.5196.37193forward

Expression of CNT30605231

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRILVVVTFGGLSFWLTPLPVLLIKKSIQQRHASRKS*

>peptide 2 (51 aa)
MAPKMKYRVPISLWLVENSHRTGFVIKLRFFPFLPYQRGAPSGASLLKKGE*

>peptide 3 (29 aa)
MRRGIPESPKKCMGKKVRLTPKKVIQKWI*

>peptide 4 (31 aa)
MSGAPIRIGTNQLPDPPIIAGITIKKIIKKA*

>peptide 5 (49 aa)
MALSGKGDSPKIWIKRSSGSLRRRLKSWSVKFAFNSRTVMSKISLDRAL*

>peptide 6 (61 aa)
MSSPEFAGTIPVSPPMVNKKMNPTANNMGVLYCIEPPHMVAIQLKILIPVGTAMIMVAAVK*

>peptide 7 (31 aa)
MKYYLIAEMPCQVHLSESEQTNYQIHLSSPA*

>peptide 8 (78 aa)
MGSPPPAGSEKVVLKFRSVNNMVIAPASTGSDNKSGNAVTRTDHTKRGDLCIVIPGPRMLEIVVIKLIEPKMDETPDR*

>peptide 9 (68 aa)
MTLEKVLHRIGYGSPCYINRCGIKDIVWPRGRFPILLCWFEISLHNEVRAFTTMSWFWGLILSCMIFF*

Sequence

>CNT30605231
TAACTTTCGCCACGAAAATGCGATAGGAATTCTGTATATATATGGCAGCGATGCCTGTGCTCTTGTAATAGATTGAGCCAGTACCTAAGAACCTGCTCTA
CTAAAACTTTGTCAAAACGAGAGCGCGCATTTTCTAAATTCAAATTGACAGACACCATTTTTAGGTCAAGATACTCCAATGCCTCCCTTCTTATGGCCCT
TTCGGGAAAAGGAGATTCCCCCAAAATTTGGATTAAGCGATCATCTGGTTCGCTGAGAAGGAGATTAAAAAGCTGGTCCGTCAAATTTGCTTTCAATTCG
AGGACTGTAATGTCGAAGATTTCATTGGATAGAGCACTGTGATAGTTCCGAATGTTGATGGCTTCGTTCAGATTCAGATTGTTTCTCACTAACGTTGCGT
ATTCACCGTGGTTAAGTTGAGGAGGCAACCGATCGATTAATCGGTTTTCGAGGTTTCGTATCCGCGAGAACAGCTCTGCTTCCACGTGCTCGTTTTGCGC
GCGAAAGTTGTCCAAGACTTGTGCCGCGGGTACTTCCCCCTCCTGTAAAACAGCAGTCCAGCTTGAGCTGGATCTTGACAGGGATTCCAGAGCGCCAGTC
CAGCTTGAAGAAGCATCGCCCGAATGATCCGCCGCAAAGACAACCTTATTGGGATTAGTGATAGAAAGGCAGAGCGCCATTAGGACAAAAAGTAAAATCG
AACTGACAAATCGGACTAAAGGCTTAACCATCCACAAACTTAGATTGATAAAGATCTTACTGAAAAAAGCAGCAAATAATATCTTTCTATTTCTAGCCGT
GGAAAACAATTTCATTTTTCTTTCATTCTTTTCATTCTCCGCTCCCCCAAAAAAAGGAGAGACTTCATTTTCACTGTACGAGTAGTGAAAAACTATAGTT
TACTTTTATTGGTTGTTGACCAACGGAAGACATGGGAGTTTTGGGCGTAAAAGTGGCTTTCTTCTCTTAATTCATTCTTTTGAACAGCTTGAAAACTTTT
TTGTAGGCGATTGGTATTCCTAATTTTTTTTTTTTTTTAGTTTTGTTTGTTCTCGAAAGTCTTCGTCTCCTTGATAGCTGGAAGTTCTCCAAAAGTATGA
AAAGCAGGAGGACTTTGTACCATCCATTCCGGTGTGGTTGAATTCTGTTCAACAGCCCAAGGACTTGGAGCACATCTTTTGTTATTTCCACTGCTTGAAG
TTATTGTTACGACCACGAAGAAACGACAAATCCCAACTACGGATATATAAGAGCCAAAACTGCTAAGGGCATTCCATCCAGCGTAAGCATCTGGATAATC
GGGAATGCGACGTGGCATACCCGAAAGCCCTAAGAAATGCATGGGAAAGAAGGTCAGATTAACCCCGAAAAAAGTGATCCAAAAATGGATTTGACCTAAA
GTTTCAGGGTATGTCCGACCAAAGATTTTACCCACCCAATAGTGAAATCCTGCAAATAAAGCAAAAACGGCTCCCATAGAAAGTACATAATGGAAATGTG
CAACCACATAATAAGTATCATGTAGAGCAATGTCTAGCCCAGAATTTGCCGGGACTATTCCAGTGAGTCCCCCTATGGTGAACAAAAAGATGAACCCTAC
AGCAAATAACATGGGTGTTTTGTATTGTATCGAACCTCCCCACATGGTAGCGATCCAACTAAAGATTTTGATTCCAGTGGGGACAGCTATGATCATGGTA
GCTGCGGTGAAGTAGGCACGGGTATCAACGTCTAAGCCCACAGTAAACATATGATGAGCCCAAACAAGAAATCCAAGAACACCTATACTGATCATGGCAT
AAACCATGCCTAGATACCCGAAGACCGGTTTTCCCGAAAAAGTCGAAACGATATGACTTATGATACCGGATCCAGGCAAAATGGGAATATACACCTCTGG
ATGACCGAAGAACCGAAAGAGATGCTGGTATAATATGGGGTCTCCCCCTCCAGCGGGATCAGAAAAGGTTGTATTAAAGTTTCGATCGGTTAATAACATG
GTAATTGCCCCTGCCAGTACCGGAAGTGATAATAAAAGTGGGAATGCTGTCACTAGAACGGACCACACAAAAAGGGGTGATCTATGCATAGTCATTCCAG
GTCCACGCATGTTGGAGATAGTTGTTATAAAATTGATAGAACCTAAAATGGACGAAACACCAGATAGATGAAGACTAGAAATTGCTGAATCAACTGCTCC
TCCAGAATGGCTGGTAATACCGCTTAAGGGCGGATAGACCGTCCACCCAGTGCCGCTACCCACTTCTACTAAGGCTGAGCTTAATAGGAGCAAGAGACTT
GGTGGCAACAACCAGAATGAAATATTATTTAATCGCGGAAATGCCATGTCAGGTGCACCTATCAGAATCGGAACAAACCAATTACCAGATCCACCTATCA
TCGCCGGCATAACCATAAAAAAGATCATTAAAAAAGCGTGAGCCGTTATTAAAACATTATAAAGTTGATGATTTCCACCAAGAATTTGATCGCCGGGTCG
TGCTAATTCCATACGAATCAGTACTGAGAAGCATGTGCCCATCACTCCAGCAATGGCACCGAAGATGAAATATAGAGTCCCTATATCCTTGTGGTTAGTG
GAGAACAGCCATCGGACCGGATTTGTCATAAAATTGAGATTCTTTCCTTTCCTTCCTTATCAGAGAGGGGCCCCGAGCGGGGCTTCTTTATTGAAAAAGG
GGGAGTGAGGGGGGAAGGTCCGGAAAGCCCTCACTTTATTGATGGGACATCTTGATCCCCTTTTCCTCTAACCCCCCGTTCTGGTTCAGGAAAAGGTCAA
CGCAAGGATCTTACTTCGAAGCAATCTCTGGAGTTTTTCCTTATCCGAACGGGTCTTGCAAGAAAATAGGATTTCATATTGAGCTCCAAATATACGCTGG
CGTTTTAACCGAAGACTTCTTGCGCAATTCATGCCTTTCTGTTTTTATGACCAGAAATTGTTTCTTGATTTCCATTTCAAATTGTTCTCTGGACTTTTTA
TCAATATGAGGTGATCGTAACACAGTATATAAGACTCGTGATTCAGGCAATCCAATCTTCCGTGTGTAAGGCGGAAGCCCCCAAAAAAGGTTTTCCATAA
ATGGGTGATCAAAAGATCGAATCACTATGCGTATCTTGGTGGTCGTTACTTTTGGTGGTCTTTCTTTTTGGCTGACTCCTCTTCCTGTTCTATTGATCAA
AAAAAGCATCCAGCAGCGCCACGCCAGTAGAAAGAGTTAAGCTACTAAGCTAAGCTGCTGTTGGGGAACTTGGTTGTTAACCAACGCAACGGCGCTAACC
AAAACCGCCTCCTGCCGCCTAATTTAAAAAATGAAGTAGTTGGTGGAATTCATCACTAGCAAGACCAAGCTGAGTGATGTTCTGCAAAACAGAAGAAACA
TTTTGCAGAGTTAGATCATTCCCAAGGATGTCAGTGACCAGTTGCCCGTAGGTCCAATTAGGCGGCAGGGGGATATTATGACGTTGGAAAAGGTGCTCCA
CCGTATCGGTTATGGCTCCCCTTGTTATATTAACCGCTGTGGTATAAAGGATATCGTTTGGCCCCGCGGGAGGTTCCCCATTTTATTATGCTGGTTTGAA
ATTTCATTACATAATGAGGTAAGGGCGTTTACAACTATGAGTTGGTTTTGGGGCCTTATCTTATCATGCATGATTTTTTTTTAACTTAACATTCATTCGC
TTCTTGCTTTGAAGCGGCATACCGGAAAAAAAGCCCTTAT