Detailed information on CNT30371457


BLAST search results

BLAST vs Swiss-Prot:
sp|P14578|COX1_ORYSJ, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549614Oryza glumipatulaIpomoea triloba18.5345.8395.04423forward
CNT30402960Oryza glumipatulaBeta vulgaris32.4163.4189.32740forward
CNT30187765Oryza glumipatulaSecale cereale20.8960.6997.06477forward
CNT30223362Oryza glumipatulaHordeum vulgare19.3610098.42442forward
CNT30555227Oryza glumipatulaOryza glaberrima33.6467.49100768forward
CNT30437404Oryza glumipatulaAegilops tauschii27.6810098.89632forward
CNT30605231Oryza glumipatulaGossypium raimondii56.9434.7694.541300forward
CNT30205015Oryza glumipatulaHelianthus annuus17.9610093.17410forward
CNT30682609Oryza glumipatulaTriticum urartu57.3450.6298.71309forward
CNT30481012Oryza glumipatulaChara braunii12.9727.6985.14296forward

Expression of CNT30371457

Peptides detected in this lncRNA

>peptide 1 (67 aa)
KISSFGESRGSEECSLRREIGVQRLSLRRRGHGEAIRQERCRRICPPQRVKPSLRTKSSCGTHCMSS*

>peptide 2 (45 aa)
MRRGMPESPKKCMGKKVRLTPKKVIQKWIWPKVSGYVRPKILPTQ*

>peptide 3 (64 aa)
RSHPSANLGAQKSAPYDGKLGSKDYLFDDVDTGRRSDKRDAEEYALLNGSSPRSELNHPAALTA*

>peptide 4 (61 aa)
MSSPEFARTIPVSPPMVNKKMNPTANNMGVLYCIEPPHMVAIQLKIFIPVGTAMIMVAAVK*

>peptide 5 (37 aa)
MLVILNRAPFLLSEVRRGRRTNDVSLLARDLLPEPRH*

>peptide 6 (50 aa)
MCHCTGSSEKVEVLSFTLSVNSRFRYTRKIAYDINQLSPSVEEFLIAFDV*

Sequence

>CNT30371457
AAGATCTCATCCTTCGGCGAATCTAGGGGCTCAGAAGAGTGCTCCCTACGACGGGAAATTGGGGTCCAAAGACTATCTCTTCGACGACGTGGACACGGGG
AGGCGATCCGACAAGAGAGATGCAGAAGAATATGCCCTCCTCAACGGGTCAAGCCCTCGCTCAGAACTAAATCATCCTGCGGCACTCACTGCATGAGCTC
ATAGGGCAAGATGAAGAGAAGGAGAAAGGCTAAAGAGATCGTCAACTTCACCTTGGCATGCTTCCATCAGCGCTGAAAAGACAGCATTGAACGAGAAGAG
AACTAAGGCAAGGCTGGTGATGTGCCACTGTACGGGGAGCTCTGAGAAAGTAGAAGTGCTTTCCTTCACGCTGAGCGTGAACTCTCGATTTCGCTATACG
AGGAAGATTGCTTATGACATCAATCAGCTAAGTCCGTCTGTCGAAGAATTTCTCATTGCATTCGATGTTTAGAGTAATAGTATAGAGTGTTTGGTCTCGC
TTTTAAGTTGTATCGGCTGGCAATATGCCATAGCGGCTGGTTCAGAATATCCCCCTCGCGAACCTCCACCCGCGGACCAAGACTCCAACCGAAGCACAGA
CCTGAGAATTGGTAGTCGGAGAATCAGTAGCTTGTAAATAGATTTTCTGTTATGCGATGCTCGTAATTCTCAATAGGGCCCCCTTTCTGTTAAGTGAAGT
GAGGCGGGGTCGCCGAACGAACGACGTTAGTTTACTTGCACGCGATCTCCTTCCAGAGCCAAGACATTAACAGTCTAGAATCTTTTTTCATTTTTTACGT
TCTGTTAGGTTCTTATCTTAGATTCCGTCATGACGGAGCCTAGACCTTTTCTTCTTTTACTTCACACAATAGAAAATTGAATTAATATATATTAAATATA
TTATTTTATAAGGGCAAATATATATAATATATAATATATTATTTTTTATGGGCAATAGTTAGGAGAGGTGCGCCTAGCTTTTTGTCTCTTTGATAGCTGG
AAGTTCTCCAAAAGTATGAAAGGCTGGAGGGCTTTGTACCAACCATTCTAGTGTGGTTGGATTCTGTTCAACAGCCCAAGGACTTTCCGCACATCTTTTG
TTCTTTCCACTGCTTGAAGTGATTGCGACAACTACGAAGAAACGACGAATCCCAACTACGGATATATAAGAACCGAAACTGCTCAGAGCATTCCATCCGG
CGTAAGCATCTGGATAATCTGGAATGCGACGTGGCATGCCCGAAAGCCCTAAGAAATGCATGGGAAAGAAGGTCAGATTAACCCCGAAAAAAGTAATCCA
AAAATGGATTTGGCCTAAAGTTTCAGGATATGTCCGACCAAAGATTTTACCCACCCAATAGTAAAATCCAGCAAATAAAGCAAAAACGGCTCCCATAGAA
AGTACATAATGGAAATGTGCAACCACATAATAAGTATCATGTAGAGCAATGTCTAGCCCAGAGTTTGCTAGAACAATTCCAGTGAGCCCTCCTATGGTGA
ACAAAAAGATGAACCCTACAGCAAATAACATGGGTGTTTTGTATTGTATCGAACCTCCCCACATGGTAGCAATCCAACTAAAGATTTTTATTCCAGTGGG
CACAGCTATGATCATGGTAGCTGCGGTGAAGTAGGCACGCGTATCAACGTCTAAGCCCACAGTAAACATATGATGAGCCCAAACTAGAAATCCAAGAACA
CCTATACTTATCATGGCATAAACCATGCCTAGATACCCGAAGACCGGTTTTCTTGAAAAGGTCGATACGATATGACTAATAATACCGAATCCAGGCAGAA
TGAGAATATACACCTCTGGATGACCGAAGAACCAAAAGAGATGCTGGTATAATATTGGGTCTCCCCCTCCTGCAGGATCAAAAAAGGTTGTATTAAAGTT
TCGATCGGTTAATAACATTGTAATTGCCCCTGCCAGTACCGGAAGTGATAATAAAAGTAGGAATGCTGTCACTAGAACGGACCACACAAAAAGTGGTAAT
CTATGCATAGTCATTCCAGGTCCACGCATGTTGAAGATAGTTGTTATAAAATTGATAGAACCTAAAATTGATGAAACACCTGATAGATGAAGACTAAAAA
TTGCTAAATCAACTGCTCCTCCAGAATGGCTGGTAATACCACTTAAGGGCGGATAGACCGTCCACCCAGTGCCGCTGCCCACTTCTACTAAGGCTGAGCT
TAATAGGAGCAAGAGACTTGGTGGCAACAACCAGAATGATATATTATTTAATCGTGGAAATGCCATGTCAGGTGCACCTATCA