Detailed information on CNT30437404


BLAST search results

BLAST vs Swiss-Prot:
sp|P68540|COX1_AEGCO, E-value = 5e-135

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30402960Aegilops tauschiiBeta vulgaris45.5724.6893.06288forward
CNT30223362Aegilops tauschiiHordeum vulgare68.6798.1999.77434forward
CNT30555227Aegilops tauschiiOryza glaberrima47.1526.1998.66298forward
CNT30605231Aegilops tauschiiGossypium raimondii10016.994.78632forward
CNT30682609Aegilops tauschiiTriticum urartu10024.4499.84632forward
CNT30371457Aegilops tauschiiOryza glumipatula10027.6898.89632forward

Expression of CNT30437404

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSSPEFARTIPVSPPMVNKKMNPTANNMGVLYCIEPPHMVAIQLKILIPVGTAMIMVAAVK*

Sequence

>CNT30437404
CAACCACATAATAAGTATCATGTAGAGCAATGTCTAGCCCAGAGTTTGCTAGAACTATTCCAGTGAGCCCTCCTATGGTGAACAAAAAGATGAACCCTAC
AGCAAATAACATGGGTGTTTTGTATTGTATCGAACCTCCCCACATGGTAGCGATCCAACTAAAGATTTTGATTCCTGTGGGCACAGCTATGATCATGGTA
GCTGCGGTGAAGTAGGCACGCGTATCAACGTCTAAGCCCACAGTAAACATATGATGAGCCCAAACTAGAAATCCAAGAACACCTATACTTATCATGGCAT
AAACCATGCCTAGATACCCGAAGACCGGTTTTCTTGAAAAGGTCGATACGATATGACTAATAATACCAAATCCAGGCAGAATGAGAATATACACCTCTGG
ATGACCGAAGAACCAAAAGAGATGCTGGTATAATATTGGGTCTCCCCCTCCTGCAGGATAAAAAAAGGTTGTATTAAAGTTTCGATCGGTTAATAACATT
GTAATTGCCCCCGCCAGTACCGGAAGTGATAATAAAAGTAGGAATGCTGTCACTAGAACGGACCACACAAAAAGTGGTAATCTATGCATAGTCATTCCAG
GTCCACGCATGTTGAAGATAGTTGTTATAAAA